RetrogeneDB ID:
retro_mputfur_101
Organism:
Location:
GL896955.1:1617946-1618414 (+)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
74.45 %
Coverage:
86.16 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_101
ATGGTCAATCCCACTGTGTTCTTCAACATCACTATTGAGGGCAAGCTCCATCTCCTTCCA
ACTGTTTGCAAAGTTCCAAAAGCAGCAGAAAACTTTTGTGCTCTGAACACTGGGGAGAAA
GGATTTCATTATAAAGGTTCCTGCTTTCACAGGATTATTCCAGGACTTCTGTGCCAGGGT
GATAACTTCACGTGCCATAATGGCACTGGCAGCAAGTTCATCTATGGGGAGAAATTTGAT
GATGAGAATTTCATCCTGAAGCACATGGGTCCTGGAACCTCACACGTGGAAAATGTTAAT
GGTTCCCAGCTTTTCATCTGTACTGCCAAGACTGAGTGGTTGGATGGCGAGTACGTGGTC
TTTGGCAAGGTGAGACAGTGCATGAATATTGTGGAACCCATGGAGTGCTTTGGGTCCACA
AATGGCAAGACTAACAAGATCACCACTGCTGACCGTGGACAAATCTAG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
KVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFDDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHV
KVPK.AENF.AL.TGEKGF.YKGSCFHRIIPG..CQG..FT.HNGTG.K.IYGEKFDDENFILKH.GPG.....N.....NGSQ.FICTAKTEWLDG..V
Retrocopy
KVPKAAENFCALNTGEKGFHYKGSCFHRIIPGLLCQGDNFTCHNGTGSKFIYGEKFDDENFILKHMGPGTSHVEN----VNGSQLFICTAKTEWLDGEYV


Parental protein
VFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQI
VFGKV...MNIVE.ME.FGS.NGKT..KIT.AD.GQI
Retrocopy
VFGKVRQCMNIVEPMECFGSTNGKTN-KITTADRGQI


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide