RetrogeneDB ID:
retro_mputfur_1011
Organism:
Location:
GL896994.1:3190986-3191584 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
66.34 %
Coverage:
98.04 %
Frameshifts:
2
Stop codons:
6


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_1011
TACAAGTATATCCAGGAGCTATGGAAGAAGAAGCAGTCTGATGTAATGTGCTTTCTTCTC
AGGATGCCCTGCTGGGAATACCACCAGCTCTCTGCCCTCCACGGGGCCCCCTGTCTAACC
TAGCCCAATAAAGTATGCAGACTGGGATACCAGGCCAACCAAGGTTATATCATATGTCAG
ATTCATGTGTGATATGGTGGTTGCAAATGCCTGGTTCCTAAGGGTGCTACCTACAACAAG
CCTGTTCATCACAGTGTTAACAAGCTAAGGTTTGCCTTCAGCCTTCAGCCTGTTGCAGAG
GAGTAAGCTGGACACTACTGTGGGGTTCTGAGAGTCTTGAATTCTTACTGAATTGGCAAA
GATACTACCTACAAATTCTTTGAGGTTGTCCTCCGTGATCCATTCCTTAGAAGTATCAAA
AGAAATCCTGACACCTAGTGCATCAGCAAACCAGTCCATAGCACAGAGAGATTCAAGGGC
TGAAATCTATACACTGCAAGAACCAACGCCTAGGAAGGGCCACAAATTCTACCACACTAT
TGTTGGTTCTTGCCAGGCAGTATTGTGAAGACACAATACTCTCCAGCTCCACCATTAC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
YKYIQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAE
YKYIQELW.KKQSDVM.FLLR..CW.Y.QLSALH.AP..T.P.K..RLGY.A.QGY.I..I.V..GG.K..VPKGATY.KPVHH.VN.L.FA.SLQ.VAE
Retrocopy
YKYIQELWKKKQSDVMCFLLRMPCWEYHQLSALHGAPCLT*PNKVCRLGYQANQGYIICQIHV*YGGCKCLVPKGATYNKPVHHSVNKLRFAFSLQPVAE


Parental protein
ERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAIRRNPDTQWITKPVHK-HREMRGLTSAGRKSRGLG-KGHKFHHTIGGSRRAAWRRRNTLQLH
E.AG..CG.LRVLNSY..G.D.TYKFFEV.L.DPF...I.RNPDT..I.KPVH..HRE..GL.S...K...LG.KGHKF.HTI.GS..A...R.NTLQLH
Retrocopy
E*AGHYCGVLRVLNSY*IGKDTTYKFFEVVLRDPFLRSIKRNPDT*CISKPVHS/HREIQGLKSIHCKNQRLG/KGHKFYHTIVGSCQAVL*RHNTLQLH


Parental protein
RY
.Y
Retrocopy
HY


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide