RetrogeneDB ID:
retro_mputfur_1012
Organism:
Location:
GL896994.1:7472476-7472893 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
69.72 %
Coverage:
80.0 %
Frameshifts:
2
Stop codons:
1


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_1012
ATGAGCATCCAGATTCATCAGAATTATTCCATCAAGGTGGAGGGAGCCATCAACTACCTG
GTCAACATGCATCTGCAGGCCACCTACACCTACCTCTCTCTGGGCTTCTGTTTCAACCAA
AATGCTGTGGCTCTGAAGAACATGGGCCACTTCTTCGAGCAGGCAGATGAGAAGCCCAAG
GGTACTGAGTGTCTCTTGAAAATGAAAAACCACTGCAGTGGCCACACCCTTTTGCAAGAT
GTGCAGAAGCCATCCTAAGATGAGTGGAGTAAAACCCTGGATGCCATGGAAGCCACCTGG
TTCTAGAGAAGAACCTGAATCAGGGCCTTTTGGATCTACATGCCCAGGGTTTCTGCACAT
ATAGACCCCCACCTGTATGACTTCCTGGAGAACTTCTTCCTGGATGAGGAGGTGAAG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MSSQIRQNYSTEVEAAVNRLVNMHLRASYTYLSLGFYFDRDDVALEGVGHFFRELAEEKREGAERLLKMQNQRGGRALFQDVQKPSQDEWGKTLDAMEAA
MS.QI.QNYS..VE.A.N.LVNMHL.A.YTYLSLGF.F....VAL...GHFF.E.A.EK..G.E.LLKM.N...G..L.QDVQKPS.DEW.KTLDAMEA.
Retrocopy
MSIQIHQNYSIKVEGAINYLVNMHLQATYTYLSLGFCFNQNAVALKNMGHFF-EQADEKPKGTECLLKMKNHCSGHTLLQDVQKPS*DEWSKTLDAMEAT


Parental protein
-LVLEKSLNQALLDLHALG-SARTDPHLCDFLENHFLDEEVK
.LVLEK.LNQ.LLDLHA.G.SA..DPHL.DFLEN.FLDEEVK
Retrocopy
/LVLEKNLNQGLLDLHAQG\SAHIDPHLYDFLENFFLDEEVK


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide