RetrogeneDB ID:
retro_mputfur_1018
Organism:
Location:
GL896995.1:623115-623311 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
68.06 %
Coverage:
62.28 %
Frameshifts:
1
Stop codons:
0


Parental gene:
Parental gene symbol:
RPLP1
Parental gene aliases:
No gene alias available
Parental gene description:
ribosomal protein, large, P1 [Source:HGNC Symbol;Acc:10372]

Genomic region (view in browser)





>retro_mputfur_1018
TCGGAGCTCGCCTGCATCTATGTGGCCCTGAGCCTACTCCACGAGGAGGTGATAGTCACG
GAAGATAAGATCAATGCCCTCATTAAAGCAGCGGGTGTAAGTGTTGAACTTTTCGGGCTT
GTTTGCAAAGGCCACGGTCAGTGTCAACATCAGCAATGTAGGGGCTAGTGGATCTGCCCC
AGCAGCACGGCCAGCC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
SELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGL-FAKALANVNIGSLICNVGAGGPAPAAGAA
SELACIY.AL.L...EV.VTEDKINALIKAAGV.VE.F..GL.FAKA...VNI.....NVGA.G.APAA..A
Retrocopy
SELACIYVALSLLHEEVIVTEDKINALIKAAGVSVELF--GL\FAKATVSVNIS----NVGASGSAPAARPA


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide