RetrogeneDB ID:
retro_mputfur_1020
Organism:
Location:
GL896995.1:3836702-3836974 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
78.26 %
Coverage:
98.91 %
Frameshifts:
1
Stop codons:
2


Parental gene:
Parental gene symbol:
LAMTOR5
Parental gene aliases:
No gene alias available
Parental gene description:
late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 [Source:HGNC Symbol;Acc:17955]

Genomic region (view in browser)





>retro_mputfur_1020
ATGGAGGAGACCTTGGAGCAGCACTTGGAGGACACAATGAAGAATCCTTCCATTACTGGA
ATCTTGCACACAAATTCACAAGGACTTAATTTGGGCTTCTGTGAGAGCCTGTCAGATTAG
CATGCTGGAGTCATATCTGTTCTAGACTAGCAAGCAGCAAGCTAACCTCAGACCCAAATG
ATTCTCCTGTGGTGTGTGTAGAATCAGATAATGGGAGCATTATGATCCAGAAACATGACA
GCATCACAGTAGCAGTGTGCAAAATGACCTCT


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MEATLEQHLEDTMKNPSIVGVLCTDSQGLNLGCRGTLSDEHAGVISVLAQQAA-KLTSDPTDIPVVCLESDNGNIMIQKHDGITVAVHKMAS
ME.TLEQHLEDTMKNPSI.G.L.T.SQGLNLG....LSD.HAGVISVL..QAA.KLTSDP.D.PVVC.ESDNG.IMIQKHD.ITVAV.KM.S
Retrocopy
MEETLEQHLEDTMKNPSITGILHTNSQGLNLGFCESLSD*HAGVISVLD*QAA/KLTSDPNDSPVVCVESDNGSIMIQKHDSITVAVCKMTS


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide