RetrogeneDB ID:
retro_mputfur_1026
Organism:
Location:
GL896997.1:5599909-5600225 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
59.26 %
Coverage:
60.57 %
Frameshifts:
1
Stop codons:
3


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_1026
AAGAGGCAAAACAAGCCTGGTGGCCACGCCCTCTTCCAGGACGTACAGAAGGTGTCCCCG
TAGGAGTGCGGGAAAGCCCTGGGCTCCACGGAAGCCTCCACAGCTCTGGGAAAGAACCTC
AACCAGGCCCTTTTTGGATCTGCATGCCCTACGCTCCGCTGGCACAGACGCCCATCTCAG
TGATTTCCTGGAGAACCACTTGCTACATGACGAAAAGCCAAGAAGATTAGGAGCACCTGT
CACCTGACACCTCGGCAGGCTGGCTGCCCCCCAGACTGGGCTGTGAGAGTATCTTTTTGA
AAGGCTCGCTGTCGAG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
KMQNQRGGRALFQDVQKPSQDEWGKTLDAMEAALVLEKSLNQAL-LDLHALGSARTDPHLCDFLENHFLDEEVKLIKKMGDHLT-NLRRLAGPQAGLGEY
K.QN..GG.ALFQDVQK.S..E.GK.L...EA...L.K.LNQAL.LDLHAL.SA.TD.HL.DFLENH.L..E.......G...T..L.RLA.PQ.GL.EY
Retrocopy
KRQNKPGGHALFQDVQKVSP*ECGKALGSTEASTALGKNLNQAL\LDLHALRSAGTDAHLSDFLENHLLHDEKP--RRLGAPVT*HLGRLAAPQTGL*EY


Parental protein
LFERLTLK
LFERL...
Retrocopy
LFERLAVE


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide