RetrogeneDB ID:
retro_mputfur_1028
Organism:
Location:
GL896997.1:3561012-3561254 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary

Identity:
71.08 %
Coverage:
66.39 %
Frameshifts:
1
Stop codons:
0


Parental gene:
Parental gene symbol:
Gm2178
Parental gene aliases:
No gene alias available
Parental gene description:
predicted gene 2178 [Source:MGI Symbol;Acc:MGI:3780348]

Genomic region (view in browser)





>retro_mputfur_1028
GAGGCTTTCAGAATGGCCCAGTGTTTGACACACGTCCCAGGCTGCCCTACAGTACAGCTT
CTGACCAGACTTTGAGGCTGTCCCTAAGCCCTGGTAATAGAATTGTTTACCTTTTCGAGA
AGGTTGGGAAAGCACCCAAAACCACCCGGGGCGTGTGCCCAGGCCAACTTCAAGGAGTTC
GTGCTGGGAGACCCAAGGTTCTTAGGAGACTGTTTAAAACGAAAAAGCACGTCAGCAGGG
CC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
KAFRMVQRLTY-RRRLSYNTASNKT-RLSRTPGNRIVYLYTKKVGKAPKSACGVCPGRLRGVRAVRPKVLMRLSKTKKHVSRA
.AFRM.Q.LT..R.RL.Y.TAS..T.RLS..PGNRIVYL...KVGKAPK...GVCPG.L.GVRA.RPKVL.RL.KTKKHVSRA
Retrocopy
EAFRMAQCLTH/RPRLPYSTASDQTLRLSLSPGNRIVYLF-EKVGKAPKTTRGVCPGQLQGVRAGRPKVLRRLFKTKKHVSRA


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide