RetrogeneDB ID:
retro_mputfur_103
Organism:
Location:
GL896902.1:24695091-24695631 (+)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
97.24 %
Coverage:
100.0 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
UBE2C
Parental gene aliases:
No gene alias available
Parental gene description:
ubiquitin-conjugating enzyme E2C [Source:HGNC Symbol;Acc:15937]

Genomic region (view in browser)





>retro_mputfur_103
ATGGCCTCCCAGAACCGCGACCCAGCTGCGGCCAGCATCGCCGCCGCCCGCAAAGGAGCT
GAGCCCAGCGGGGGCGCCGCCCGTGGACCCGTGGGCAAGAGGCTACAGCAGGAGCTGATG
ACCCTCATGATGTCCGGTGACAAAGGAATTTCTGCCTTCCCTGAATCAGACAACCTTTTC
AAATGGGTGGGGACCATCCACGGAGCAGCTGTCACAGTGTATGAAGACCTGCGGTATAAG
CTCTCCTTGGAGTTCCCCAGTGGCTACCCCTACAATGCGCCCACAGTGAAATTCCTCACA
CCCTGCTACCACCCCAAAGTGGACACCCAGGGGAACATCTGCCTGGACATCCTGAAGGAC
AAGTGGTCAGCCCTGTATGACGTCAGGACCATCCTGCTGTCCATCCAGAGCCTGCTAGGA
GAACCAAACATTGATAGTCCTTTGAACACACACGCTGCCGAGCTCTGGAAAAACCCCACA
GCCTTTAAGAAGTACCTACAAGAAACCTACTCAAAGCAGGTCTCCAGCCAAGATCCCTGA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MASQNRDPAAASVAAARKGAEPSGGAARGPVGKRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLT
MASQNRDPAAAS.AAARKGAEPSGGAARGPVGKRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAA.TVYEDLRYKLSLEFPSGYPYNAPTVKFLT
Retrocopy
MASQNRDPAAASIAAARKGAEPSGGAARGPVGKRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAVTVYEDLRYKLSLEFPSGYPYNAPTVKFLT


Parental protein
PCYHPNVDTQGNICLDILKDKWSALYDVRTILLSIQSLLGATEPNIDSPLNTHAAELWKNPTAFKKYLQETYSKQVSSQDP
PCYHP.VDTQGNICLDILKDKWSALYDVRTILLSIQSLLG..EPNIDSPLNTHAAELWKNPTAFKKYLQETYSKQVSSQDP
Retrocopy
PCYHPKVDTQGNICLDILKDKWSALYDVRTILLSIQSLLG--EPNIDSPLNTHAAELWKNPTAFKKYLQETYSKQVSSQDP


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide