RetrogeneDB ID:
retro_mputfur_1034
Organism:
Location:
GL896999.1:1326970-1327593 (+)
Status:
KNOWN_PSEUDOGENE
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
99.52 %
Coverage:
100.0 %
Frameshifts:
1
Stop codons:
0


Parental gene:
Parental gene symbol:
RPL7
Parental gene aliases:
No gene alias available
Parental gene description:
ribosomal protein L7 [Source:HGNC Symbol;Acc:10363]

Genomic region (view in browser)





>retro_mputfur_1034
ATGCTTCGAAAGGCAAGGAGGAAGCTTATCTATGAGAAAGCCAAGCATTACCACAAGGAG
TACAGACAGATGTACCGGACCGAGATTCGGATGGCGAGGATGGCGAGAAAAGCTGGCAAC
TTCTATGTACCTGCAGAACCCAAATTGGCGTTTGTCATCAGGATCAGAGGCATCAATGGT
GTGAGCCCAAAGGTTCGAAAGGTGTTGCAGCTCCTTCGCCTTCGTCAAATCTTTAATGGC
ACCTTTGTTAAGCTCAACAAGGCTTCAGTTAACATGTTAAGGATTGTGGAACCATATATA
GCATGGGGGTACCCTAACCTGAAGTCAGTGAATGAATTGATCTACAAGCGTGGTTATGGC
AAAATCAACAAAAACGAATTGCCCTGACAGATAACACATTGATTGCCCGATCTCTTGGTA
AATATGGCATCATCTGCATGGAGGATCTGATTCACGAGATCTATACTGTTGGAAAACGTT
TCAAAGAGGCAAACAACTTTTTATGGCCCTTCAAATTATCTTCTCCACGAGGGGGGATGA
AGAAAAAGACTACCCATTTTGTGGAAGGTGGAGATGCTGGCAACAGGGAAGACCAGATCA
ATAGGCTTATTCGAAGAATGAAC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MLRKARRKLIYEKAKHYHKEYRQMYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGTFVKLNKASVNMLRIVEPYI
MLRKARRKLIYEKAKHYHKEYRQMYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGTFVKLNKASVNMLRIVEPYI
Retrocopy
MLRKARRKLIYEKAKHYHKEYRQMYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGTFVKLNKASVNMLRIVEPYI


Parental protein
AWGYPNLKSVNELIYKRGYGKINK-KRIALTDNTLIARSLGKYGIICMEDLIHEIYTVGKRFKEANNFLWPFKLSSPRGGMKKKTTHFVEGGDAGNREDQ
AWGYPNLKSVNELIYKRGYGKINK.KRIALTDNTLIARSLGKYGIICMEDLIHEIYTVGKRFKEANNFLWPFKLSSPRGGMKKKTTHFVEGGDAGNREDQ
Retrocopy
AWGYPNLKSVNELIYKRGYGKINK/KRIALTDNTLIARSLGKYGIICMEDLIHEIYTVGKRFKEANNFLWPFKLSSPRGGMKKKTTHFVEGGDAGNREDQ


Parental protein
INRLIRRMN
INRLIRRMN
Retrocopy
INRLIRRMN


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide