RetrogeneDB ID:
retro_mputfur_1039
Organism:
Location:
GL896999.1:3538388-3538573 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
60.32 %
Coverage:
51.75 %
Frameshifts:
1
Stop codons:
0


Parental gene:
Parental gene symbol:
PPDPF
Parental gene aliases:
No gene alias available
Parental gene description:
pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish) [Source:HGNC Symbol;Acc:16142]

Genomic region (view in browser)





>retro_mputfur_1039
ATGGCAGCCATCCCTTCCAGAGGCTCGCTTGTGGCCACCCACAACTATCACCAGCCCCGC
CCGGGCGCCACTTCCAGTTACAGATCCGGCAGAGACGCGGAGTATCCTGGGGAAGCCATA
CTCACGATCCTGGTATCCCCAACACCCCCCACCTGCGGCCTGGACACTGGTGGGGAAGCT
TTTTT


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MAAIPSSGSLVATHDYYRRRLGSTSSSSSCGSAECAGEAI-PHPPGLPKAD---PGHWWASFF
MAAIPS.GSLVATH.Y...R.G.TSS..S...AE..GEAI..H.PG.P......PGHWW.SFF
Retrocopy
MAAIPSRGSLVATHNYHQPRPGATSSYRSGRDAEYPGEAI/THDPGIPNTPHLRPGHWWGSFF


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide