RetrogeneDB ID:
retro_mputfur_1041
Organism:
Location:
GL897000.1:1947617-1947882 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
68.13 %
Coverage:
65.44 %
Frameshifts:
2
Stop codons:
1


Parental gene:
Parental gene symbol:
RPL27
Parental gene aliases:
No gene alias available
Parental gene description:
ribosomal protein L27 [Source:HGNC Symbol;Acc:10328]

Genomic region (view in browser)





>retro_mputfur_1041
CTGGCCAGATGCTACTCCAAACCCACAGCAGTCACGTGAAGAGCGTTGATGATACCACCT
CAGACTGTCCTACTGTTATGTTCTGGTGGCTGAAATTAGCCACTATACGCCCAAAGTGAC
GGCTGCCATGGGCAAGAAGAAAATCGCCAAGAGGTCAAAGATCAAGTCTTTTGTGAAACT
TTGTAACTACAATCCCCTCATGCCCAAAAAGTACTCTCTGGGTATCCCCTTGGACAAAAC
TGTGGTCAACAAACATGTCTAGAGA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
LAGRYSGRKAVI-VKNIDDGTSDRP-YSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFR
LA..YS...AV..VK..DD.TSD.P.Y...LVA.I..Y..KVTAAMGKKKIAKRSKIKSFVK..NYN.LMP..YS..IPLDKTVVNK.V.R
Retrocopy
LARCYSKPTAVT/VKSVDDTTSDCP/YCYVLVAEISHYTPKVTAAMGKKKIAKRSKIKSFVKLCNYNPLMPKKYSLGIPLDKTVVNKHV*R


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide