RetrogeneDB ID:
retro_mputfur_1045
Organism:
Location:
GL897001.1:1356362-1356885 (+)
Status:
KNOWN_PSEUDOGENE
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
67.42 %
Coverage:
62.37 %
Frameshifts:
2
Stop codons:
1


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_1045
ATGTCCAGAGACATTGATGTCCTACAAATGAAGGAGGAGAATGTCCTCAAATTTTTTACA
GCAGAAACCCACTTAGGGGCAACCAACCTTGACTTCCAAATGCAACAGACATCTACAAAA
GGAAAAATGATGGTATCTACATATACACCTGAAGAGAACCTGGGAGGAGCTTCTGCTGGC
AGCTCTTGCCATTGTTGCCATTGAAAAGTCAGCTGATGTCAGGATCATATCATCCAAGAA
CACTAGCCTTTGAGCTATGCTTAAGTTTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGC
TGGAACCACTCCTATAGCTGGAAGCTTCACTAACCAGATCCAGGCAGCCTTCTGGAAGCC
CAGACTTCGAGTGGTTACTGATCCCAGGGCTGATCACCAGCCTCTCTCAGAGGCATCTAA
TGTCAACCTTCCTACCACCACTCTGTCACACGGACTCTCTCCCCTGAGCTATAAGGACAT
TGCCATCCCTTGCAACAAGGGAGCTCACTCAGTGCGTCTTGTG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQY-IYKRKSDGIYI-INLKRTWEKLLLAARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATP
MS...DVLQMKEE.VLKF..A.THLG.TNLDFQM.Q..IYKRK.DGIYI.I.LKRTWE.LLLAA.AIVAIE..ADV..ISS.NT...A.LK.........
Retrocopy
MSRDIDVLQMKEENVLKFFTAETHLGATNLDFQMQQT/IYKRKNDGIYI/IHLKRTWEELLLAALAIVAIEKSADVRIISSKNTSL*AMLKXXXXXXXXX


Parental protein
IAGRFTP--GTFTNQIQAAFREPRLLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLM
.....TP..G.FTNQIQAAF..PRL.VVTDPRADHQPL.EAS.VNLPT..L....SPL.Y.DIAIPC.NKGAHSV.L.
Retrocopy
XXXXTTPIAGSFTNQIQAAFWKPRLRVVTDPRADHQPLSEASNVNLPTTTLSHGLSPLSYKDIAIPC-NKGAHSVRLV


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide