RetrogeneDB ID:
retro_mputfur_105
Organism:
Location:
GL896926.1:4769858-4770875 (+)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
96.33 %
Coverage:
90.09 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_105
ATGGTGAAGGTTGGAGTGAACGGATTTGGCCGTATTGGGCGCCTGGTCACCAGGGCTGCT
TTTAACTCTGGTAAAGTGGATACTGTCACCATCAATGACCCTTTCATTGATCTCAACTAC
ATGGTCTACATGTTCCAGTATGATTCTACCCACGGTAAATTCCACGACACAGTCAGGGCT
GAGAACGGGAAGCTTGTCATCAATGGGAAGTCCATCTCCATCTTCCAGGAGCGAGATCCC
GCCAACATCAAATGGGGCGATGCTGGTGCTGAGTATGTTGTGGAGTCCACTGGTGTCATC
ACCACCATGGAGAAGGCTGGGGCTCACTTGAAGGGTGGGGCCAAGAGGGTCATCATCTCT
GTTCCTTCTGCTGATGCCCCAGTGTTCGTGATGGGTGTGAACCATGAGAAGTATGACAAC
TCCCTCAAGATTGTCAGCAATGCCTCCTGTACCACCAACTGCTTGGCTCCTCTAGCCAAG
GTCATCCATGACAACTTCGGCATTGTGGAGGGACTCATGACCACCGTCCATGCCATCACT
GCCACCCAGAAGACCGTGGATGGCACCTCTGGGAAGCTGTGGCGTGACGGCCGAGGGGCT
GCCCAGAACATCATCCCTGCTTCCACTGGTGTGGCCAAGGCTGTAGGCAAGGTCATCCCT
GAGCTGAATGGGAAGCTCACTGGCATGGCCTTCCGTGTCCCCACCCCCAATGTGTCTGTT
GTGGATCTGACCTGCCACCTGGAGAAAGCTGCCAAATATGATGACATCAAGAAGGTGGTG
AAGCAGGCATCAGAGGGCCCCCTTAAGGGCATCCTGGGGTATACTGAGGACCAGGTTGTC
TCCTGCGACTTCAACAGTGACACCCACTCCTCTACCTTCGATGCTGGGGCTGGCATTGCT
GGGGCTGGCATTGCTCTCAATGACCACTTTGTCAAGTTTATTTCCTGGTATGACAATGAA
TTTGGCTACAGCAACCGGGTGGTGGACCTTATGGTCCACATGGCCTCCAAGGAATAA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MVKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFNGTVKAENGKLVINGKSISIFQERDPANIKWGDAGAEYVVESTGVF
MVKVGVNGFGRIGRLVTRAAFNSGKVD.V.INDPFIDLNYMVYMFQYDSTHGKF..TV.AENGKLVINGKSISIFQERDPANIKWGDAGAEYVVESTGV.
Retrocopy
MVKVGVNGFGRIGRLVTRAAFNSGKVDTVTINDPFIDLNYMVYMFQYDSTHGKFHDTVRAENGKLVINGKSISIFQERDPANIKWGDAGAEYVVESTGVI


Parental protein
TTMEKAGAHLKGGAKRVIISAPSADAPMFVMGVNHEKYDNSLKIVSNASCTTNCLAPLAKVIHDNFGIVEGLMTTVHAITATQKTVDGPSGKLWRDGRGA
TTMEKAGAHLKGGAKRVIIS.PSADAP.FVMGVNHEKYDNSLKIVSNASCTTNCLAPLAKVIHDNFGIVEGLMTTVHAITATQKTVDG.SGKLWRDGRGA
Retrocopy
TTMEKAGAHLKGGAKRVIISVPSADAPVFVMGVNHEKYDNSLKIVSNASCTTNCLAPLAKVIHDNFGIVEGLMTTVHAITATQKTVDGTSGKLWRDGRGA


Parental protein
AQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVVDLTCRLEKAAKYDDIKKVVKQASEGPLKGILGYTEDQVVSCDFNSDTHSSTFDAGAGIA
AQNIIPASTG.AKAVGKVIPELNGKLTGMAFRVPTPNVSVVDLTC.LEKAAKYDDIKKVVKQASEGPLKGILGYTEDQVVSCDFNSDTHSSTFDAGAGIA
Retrocopy
AQNIIPASTGVAKAVGKVIPELNGKLTGMAFRVPTPNVSVVDLTCHLEKAAKYDDIKKVVKQASEGPLKGILGYTEDQVVSCDFNSDTHSSTFDAGAGIA


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide