RetrogeneDB ID:
retro_mputfur_1064
Organism:
Location:
GL897005.1:1375378-1376095 (+)
Status:
KNOWN_PSEUDOGENE
Aliases:
No gene alias available
Located in intron of:
Alignment summary

Identity:
91.21 %
Coverage:
76.11 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_1064
ATGCAGAATGTGATTAACACAGTGAAGGGAAAGGCACTGGAAGTAGCTGAGTACCTGACC
CCAGTCTTCAAGGAATCAAAGTTTAAGGAAACAGGTGTTATCACCCCAGAAGAGTTTGTA
GCGGATGGAGATCACTTAGTCCACCACTATCCAACATGGCAATGGGCTACAGGGGAAGAA
TTGAAAGTGAAGGCATACCTACCAACAGGCAAACAATTGTTGGTTACCAAAAATGTGCGA
TGCTACAACCAGTGCAAACAGATGGAATATTCAGATGAATTGGAAGCTATCATTGAAGAT
GAATATGGTGATGGGGGATGGGTAGATACTTATCATAACACAGGTATTGCAGGAATAACT
GAAGCAGTTAAGGAGATTACATTGGAAAGCAAGGACAGAATAAAACATCAAGACTGCGCA
GCAATATGTGAGGAGGAGGAAGAAGATGATGAAGGAGAACCTGCAGATATGGAAGAACAT
GAAGAAAGTGGATTGTTGGAAACAGATGAGGCTACCCTAAACACAAGAGAAACAGGAGAA
GCTTGTAAAACTAAAACTGATGCTGGAAGTGAAGATGCTATTTTGCAAACAAGAACTTAT
GACCTTTATATCACCTATGATAAATACTACCAGACACCACAATTATGGTTGTTCAGCTAT
GATGAGCAAAGGCAGCCTTTAACAGTTGAACACATGTATGAAGACATCAGTCAAGAT


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MQNVINTVKGKALEVAEYLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWQWATGEELKVKAYLPTGKQFLVTKNVPCYKRCKQMEYSDELEAIIEE
MQNVINTVKGKALEVAEYLTPV.KESKFKETGVITPEEFVA.GDHLVHH.PTWQWATGEELKVKAYLPTGKQ.LVTKNV.CY..CKQMEYSDELEAIIE.
Retrocopy
MQNVINTVKGKALEVAEYLTPVFKESKFKETGVITPEEFVADGDHLVHHYPTWQWATGEELKVKAYLPTGKQLLVTKNVRCYNQCKQMEYSDELEAIIED


Parental protein
DDGDGGWVDTYHNTGIAGITEAVKEITLESKDSIKLQDCAAICEEEEEDDEGEAADMEEYEESGLLETDEATLDTRKIVEACKTKTDAGGEDAILQTRTY
..GDGGWVDTYHNTGIAGITEAVKEITLESKD.IK.QDCAAICEEEEEDDEGE.ADMEE.EESGLLETDEATL.TR...EACKTKTDAG.EDAILQTRTY
Retrocopy
EYGDGGWVDTYHNTGIAGITEAVKEITLESKDRIKHQDCAAICEEEEEDDEGEPADMEEHEESGLLETDEATLNTRETGEACKTKTDAGSEDAILQTRTY


Parental protein
DLYITYDKYYQTPRLWLFGYDEQRQPLTVEHMYEDISQD
DLYITYDKYYQTP.LWLF.YDEQRQPLTVEHMYEDISQD
Retrocopy
DLYITYDKYYQTPQLWLFSYDEQRQPLTVEHMYEDISQD


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide