RetrogeneDB ID:
retro_mputfur_1072
Organism:
Location:
GL897006.1:6740206-6740521 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
82.08 %
Coverage:
92.92 %
Frameshifts:
0
Stop codons:
1


Parental gene:
Parental gene symbol:
EIF1
Parental gene aliases:
No gene alias available
Parental gene description:
eukaryotic translation initiation factor 1 [Source:HGNC Symbol;Acc:3249]

Genomic region (view in browser)





>retro_mputfur_1072
ACTTTTCGACCCTTTGCTGATGCAAGTAAGGGTGAGGATCTGCTTCCTGCTAGCACTGAG
CATTATATCCATATAAGAATTCAACAGAGAAATGACAGGAAGACCCTTACCACTGTCCAA
GGGATCGATGATGGTTATGATAAAAAGAAACTAGTGAAGGCATTTAAGAAATTTGCCTGC
AGTGGTACTGTAATTGATCATCCAGAATATGGAGAAGTAATTCAGCTATAGGGTGACCAG
TGCAAGAACATGTGCCATTTCCTCAGAGAGACTGGACTGGCTAAGGATGATGACCAGCTG
AAGGTTCGTGGGTTT


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
SFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLVEIGLAK-DDQ
.F.PFADASKG.DLLPA.TE.YIHIRIQQRN.RKTLTTVQGI.D.YDKKKLVKAFKK.FAC.GTVI.HPEYGEVIQL.GDQ.KN.C.FL.E.GLAK.DDQ
Retrocopy
TFRPFADASKGEDLLPASTEHYIHIRIQQRNDRKTLTTVQGIDDGYDKKKLVKAFKK-FACSGTVIDHPEYGEVIQL*GDQCKNMCHFLRETGLAKDDDQ


Parental protein
LKVHGF
LKV.GF
Retrocopy
LKVRGF


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide