RetrogeneDB ID:
retro_mputfur_1074
Organism:
Location:
GL897007.1:4410864-4411235 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
60.16 %
Coverage:
98.45 %
Frameshifts:
1
Stop codons:
4


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_1074
GTGGCACCCGTTAATAAACCTGTGGGCGGCAAGAAAAGAAACACATTCTGAAGTTCACCC
TTGACTGCATTCACCCTGTAGAAGGTGAAATCACGGATGCCGCCAATTTTAAAGACCTTT
GAGGGTTAAGAATCAAAGTGAATGGAAAAGCTGGAGGTCTTGGTGGAGGGGTTGTGTATG
TTGAAAGGAGCAAAAGCAAGATGACCATAACTTCTGACGTGACTTCTTCCCAATAGTACT
TGAAGTTTTTCACCAAGAAAGATTTGGAGAACAGTCTGCATGCTTGGTTGCACATAGCTG
GTAACAGGAAAGAGAGTCACCAGTTGCATGACTGCTAGATTAGCAAGGATGAAGAAGAGT
AGGAAGACAAG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MAPVKKLVAKGGKK-KKQVLKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPFSKRYLKYLTKKYLKKNNLRDW
.APV.K.V..GGKK.KK..LKFTLDC.HPVE..I.DAANF......RIKVNGKAG.LGGGVV..ERSKSK.T.TS.V..S..YLK..TKK.L..N.L..W
Retrocopy
VAPVNKPV--GGKK/KKHILKFTLDCIHPVEGEITDAANFKDL*GLRIKVNGKAGGLGGGVVYVERSKSKMTITSDVTSSQ*YLKFFTKKDL-ENSLHAW


Parental protein
LRVVANSKESYELRYFQINQDEEEEEDE
L....N.KES..L....I..DEEE.ED.
Retrocopy
LHIAGNRKESHQLHDC*ISKDEEE*EDK


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide