RetrogeneDB ID:
retro_mputfur_1076
Organism:
Location:
GL897008.1:2100288-2101071 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
53.9 %
Coverage:
82.24 %
Frameshifts:
3
Stop codons:
2


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_1076
AAATTATCAAGGATGGTGTATCCTCAACCAGATGGTCTAACACCCTCTAGGAAAGATGTC
CTCGTCATGACCCCTTGGATGGCTCCCATCATCTGGGAGGGGACTGTCAACACGGACATC
GTGAATGAGCAGTTCCAGCTCTGAACCACGACCCTCAGATCGACTGTATTTTCTGTGAGG
TCCTACACGATCTTCCTAAAGCAGTTCTTGCAGTCCGTCAAGAGGTACTTGGTGGGACAC
AGGGTGAACTACTGTATCTTCACTGACAAGCCAGAGTATGTTCCTCATCTCAGCCAACAG
AAAGGGAAGCAGATCATCATCCGATGCTTTGCCTGTTGGAGGGTGTCTCCACGCACGGCT
CAGAGACCATCAGCAATTTCTCCCAGCAGCGCTTCCAGCGGGAGGTGGCTTACTTCGTGT
GTACGGATGTGGACGAGAGCTTCAGCAACCACATGGGCGTGGAGATCCTCGCCTCCCTGT
TCGGGACTCTCCATCTCGCCTACCTTGGGCTCAATCAGACCGACTTCCCCTATGAATGCC
AGCCTCAGTCACGTGCCCATATTCCTGAAGATGAGGGGACTTTTATTCCATAGGGGTCTG
ATTGGGGGGTCAGTGTCAGAGGTTTACAGGCTGACCAGGGCCTGCCACGAAACCATGACG
GTGGACCAAGCCAACCACATCAAGGCCGTGTGGCATGATGAGAGCCGTCTGAACAAATAC
CTCCTTTCCCACAAGCCCTCCAAGGTCCTCTCCCCCTAGTACGGGTGGCAGAATCCTCAA
ATG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
EVPRLAYPKAQVLNPTRADVLVMTPWFAPIIWDGVFDSTVLDAQFR--NTTIGLTVFAIKKYVVFLELFLQTAERYFMVGHRVTYYIFTDRPADVPNVPL
...R..YP....L.P.R.DVLVMTPW.APIIW.G.........QF....TT...TVF....Y..FL..FLQ...RY..VGHRV.Y.IFTD.P..VP....
Retrocopy
KLSRMVYPQPDGLTPSRKDVLVMTPWMAPIIWEGTVNTDIVNEQFQL*TTTLRSTVFSVRSYTIFLKQFLQSVKRY-LVGHRVNYCIFTDKPEYVPHLSQ


Parental protein
AEGRQLVVLKVRNYARW-QEVSMHRMEMISNFSQQRFLREVDYLVCMDVDMKFSDQVGVEILSPLFGTLHPGFFRAARESFTYERRPQSQAYIPRDE-GD
..G.Q......R..A.W...VS.H..E.ISNFSQQRF.REV.Y.VC.DVD..FS...GVEIL..LFGTLH..........F.YE..PQS.A.IP.DE.GD
Retrocopy
QKGKQIII---RCFACW/EGVSTHGSETISNFSQQRFQREVAYFVCTDVDESFSNHMGVEILASLFGTLHLAYLGLNQTDFPYECQPQSRAHIPEDE/GD


Parental protein
FYYAG-GFFGGSVAEVLRLTSACHRAMVIDQANGIEAVWHDESHLNRYLLYHKPTKVLSPEYLWDEQML
FY..G.G..GGSV.EV.RLT.ACH..M..DQAN.I.AVWHDES.LN.YLL.HKP.KVLSP.Y.W.....
Retrocopy
FYSIG/GLIGGSVSEVYRLTRACHETMTVDQANHIKAVWHDESRLNKYLLSHKPSKVLSP*YGWQNPQM


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide