RetrogeneDB ID:
retro_mputfur_108
Organism:
Location:
GL896945.1:3580375-3580960 (-)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
91.81 %
Coverage:
100.0 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_108
ATGTCGACGCTGCCGCTGCGAGTGGCGGTGGTGTGCTCAAGCAACCAGAACCGGAGCATG
GAAGCGCACAACATCCTCAACAAACGGGGATTCATCGTCCGTTCTTTTGGAACGGGAACC
CATGTGAAGCTCCCGGGACCAGCACCTGACAAGCCAAATGTTTACGATTTCAAAACGACC
TACGACCAGATGTACAACGACCTCGTTCGCAAGGATAAAGATCTCTACACGCAGAACGGC
ATTTTACATATGCTGGATAGAAATAAGAGGATCAAGCCCCGCCCAGAAAGGTTCCAGAAC
TGTAGAGATATTTTCGATCTGATTCTTACCTGTGAAGAGAGAGTGTACGATCAGGTGGTG
GAAGATCTGACTTCAAGAGAGCAAGAAACCTGCCAGCCGGTACATGTGATCAACGTGGAT
ATCCAAGACAACCTTGAAGAAGCCACCCTGGGCGCCTTCCTCATCTGCGAGCTATGCCAG
TGCATTCAGCACACCGACGACATAGATAACGACATCGACGAGCTGCTCCAAGAGTTTGAG
GAGAAGAGCGGCAGAGCCTTCCTGCACACTGTCTGCTTCTACTAA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
SKRGFSVRSFGTGTHVKLPGPAPDKPNVYDFKTTYDQMYNDLLRKDKELSLSYTQNGILHMLDRNKRIKPRPERFQNCRDLFDLILTCEERVYDQVVEDL
.KRGF.VRSFGTGTHVKLPGPAPDKPNVYDFKTTYDQMYNDL.RKDK.L...YTQNGILHMLDRNKRIKPRPERFQNCRD.FDLILTCEERVYDQVVEDL
Retrocopy
NKRGFIVRSFGTGTHVKLPGPAPDKPNVYDFKTTYDQMYNDLVRKDKDL---YTQNGILHMLDRNKRIKPRPERFQNCRDIFDLILTCEERVYDQVVEDL


Parental protein
NSREQETCQPVHVINVDIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEEKSGRAFLHTVCFY
.SREQETCQPVHVINVDIQDN.EEATLGAFLICELCQCIQHT.D..N.IDELLQEFEEKSGRAFLHTVCFY
Retrocopy
TSREQETCQPVHVINVDIQDNLEEATLGAFLICELCQCIQHTDDIDNDIDELLQEFEEKSGRAFLHTVCFY


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide