RetrogeneDB ID:
retro_mputfur_1080
Organism:
Location:
GL897010.1:294728-295242 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
60.23 %
Coverage:
69.58 %
Frameshifts:
5
Stop codons:
2


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_1080
GGGGGAATCCTGGTCTCAATAAGAGTACAGGGACCTCCTCCCAAAGATACTGACTGGCAG
GGTCTGAGTGCCACTTGCGGAGCTGTGGGAGGCCCAGGGATGGGCAGAGCTGTGGGCGCA
GGAGTCCCTGCTGGGCTTCCAGTGACCCCAGGCTCCTTCAGGACTTGCTGCCCAGGCCAA
GAGGGTGAAGGGTGGGCCATCCCAGCAGGTGATGACCCCACAAGGAAGAGGCATCGTTGC
AGCCTCTGCAGCAGCTGCCACAGCCAAGACTGCAGGGGGCCCCAACCCAATATCCTGCTG
GCCACGGGAGTCCTCCCCTACCTATGGGCCAAGGGACACCCCCTCCAGGCATGGTGGGCT
CGCCCCCTGTCCCAGTGCCTCCCATGGGTCTCCCATTGGGGATCCCCTTAGAGGAGCAAC
TCCAACGGGATTGCCCCCTCCATAGATGCAGGCACCTCCCCTCATCCCTGAAGTGAAGCC
CCCCCCCCACCGGGGAATGTGCCCACCAAGGCCC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
GENLVSMTVEGPP-PKD-TGIARVPLA-GAAGGPGVGRAAGRGVPAGVPI-PQAPAGLAGPVRGV-GGPSQQVMTPQGRGTVAAAAVAATASIA-GAPTQ
G..LVS..V.GPP.PK..TG...VPLA.GA.GGPG.GRA.G.GVPAG.P..PQAP.GLA.....V.GGPSQQVMTPQGRG.VAA.A.AATA..A.GAPTQ
Retrocopy
GGILVSIRVQGPP\PKILTGRV*VPLA/GAVGGPGMGRAVGAGVPAGLPV\PQAPSGLAAQAKRVKGGPSQQVMTPQGRGIVAASAAAATAKTA\GAPTQ


Parental protein
YPPGRGTPPTPVGRATPPPGIMAPPPGMRPPMGPPIGLPPAR-GTPIGMPPPGMRPPP--PGIRGPPPPGMRPPRP
YP.G.G.PP.P.G..TPPPG....PP...PPMG.P.G.P.....TP.G.PPP.M..PP..P........GM.PPRP
Retrocopy
YPAGHGSPPLPMGQGTPPPGMVGSPPVPVPPMGLPLGIPLEE/ATPTGLPPP*MQAPPLIPEVKXXXXRGMCPPRP


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide