RetrogeneDB ID:
retro_mputfur_1083
Organism:
Location:
GL897010.1:2155642-2156013 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
62.99 %
Coverage:
78.12 %
Frameshifts:
2
Stop codons:
3


Parental gene:
Parental gene symbol:
RPL21
Parental gene aliases:
No gene alias available
Parental gene description:
ribosomal protein L21 [Source:HGNC Symbol;Acc:10313]

Genomic region (view in browser)





>retro_mputfur_1083
AAGAAAGGTGATATTATGGACTTCAAGGGAATGGGCACTGTTCAAAAAGCAGTGCCCCAC
AAATGCTACCATAGCAATACTGGAAGAATCTACAGTGTGGCTCAGCATGCTGCTGGCATT
GTTGTAAACCAGCCAAGTTTAGGAGAAGATTCTTGCCAAAAGAAATAATGTATGTATTGA
GCATATTAAGCAGTGTAAGGGCTGAGGTAATTTTCCATCACACCCTTCAGGAAGCTATCA
GAAAAAGACGGAAAAAGGGAAAGGTACCTGGGCTCCTAAAGCATCGGCTTGCCCTACCCA
GAGAAGCACACTTTGTGAGAACCAGTGGAAAGGAGACTGAGGTGCTGGAACCCATTCTCT
AGGAAGTCATG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
KKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIVVNK-QVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKEKGTWVQLKRQPA
KKGDI.D.KGMGTVQK..PHKCYH..TGR.Y.V.QHA.GIVVN..QV..KILAKR.NV.IEHIK..K....F........QKK.E.K.KGTW...K....
Retrocopy
KKGDIMDFKGMGTVQKAVPHKCYHSNTGRIYSVAQHAAGIVVNQ\QV*EKILAKRNNVCIEHIKQCKG*GNFPSHPSGSYQKKTE-KGKGTWAP-KASAC


Parental protein
P-PREAHFVRTNGKEPELLEPIPYEFM
P.PREAHFVRT.GKE.E.LEPI..E.M
Retrocopy
P\PREAHFVRTSGKETEVLEPIL*EVM


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide