RetrogeneDB ID:
retro_mputfur_109
Organism:
Location:
GL896978.1:6539094-6539691 (+)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
94.95 %
Coverage:
100.0 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_109
ATGTTCAAGGTAATCCAGAGGGCTGTGGGGCCGGCCAGCCTGAGTCTGCTCACCTTCAAA
GTCTATGCGTCACCTAAAAAGGACTCACCGCACAAAGCTTCTGTGAAGGTTAATGAGCTT
TCACTCTACTCCGTTCCCGAGGGTCAGTCTAAATATGTGGAAGAGCCAAGGACCCCACTT
GAGGAAAGCATTTCACATCTCCGACATTATTGCGAGCCGTATACAAGTTGGTGTCAGGAA
ACGTACTCCCAAACTAAGCCCAAGATGCAGAGCTTGGTTCAATGGGGGTTAGGCAGCTAT
GACTATCTCCAAAATGCACCTCCTGGATTTTTTCCAAGACTTGGTGTTATCGGTTTTGCT
GGCATTGTTGGACTTCTTTTGGCTAGAGGCTCAAAAATAAAGAAGCTGGTATATCCGCCT
GGATTCATGGGACTTGCTGCTTCTCTTTATTACCCACAACAAGCCATCGTATTTGTCCAG
GTCAGTGGGGAGAAATTATATGTCTGGGGTTTACGAGGATCCATAGTCATAGAAGATTTG
TGGAAGGAGAACTTTCAAAAGCCAGGAAATGTGAAGAATTCACCCGGAAATAAATAG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
VFQVIQRAVGPASLSLLTFKVYASPKKDSPHKASVKVNELSLYSVPEGQSKYVEEPRTPLEESISHLRHYCEPYTSWCQETYSQTKPKMQSLVQWGLGSY
.F.VIQRAVGPASLSLLTFKVYASPKKDSPHKASVKVNELSLYSVPEGQSKYVEEPRTPLEESISHLRHYCEPYTSWCQETYSQTKPKMQSLVQWGLGSY
Retrocopy
MFKVIQRAVGPASLSLLTFKVYASPKKDSPHKASVKVNELSLYSVPEGQSKYVEEPRTPLEESISHLRHYCEPYTSWCQETYSQTKPKMQSLVQWGLGSY


Parental protein
DYLQNAPPGFFPRLGVIGFAGIVGLLLARGSKIKKLVYPPGFMGLAASLYYPQQAIVFVQVSGEKLYDWGLRGYIVIEDLWKENFQKPGKNKNKKNKK
DYLQNAPPGFFPRLGVIGFAGIVGLLLARGSKIKKLVYPPGFMGLAASLYYPQQAIVFVQVSGEKLY.WGLRG.IVIEDLWKENFQKPG..KN....K
Retrocopy
DYLQNAPPGFFPRLGVIGFAGIVGLLLARGSKIKKLVYPPGFMGLAASLYYPQQAIVFVQVSGEKLYVWGLRGSIVIEDLWKENFQKPGNVKNSPGNK


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide