RetrogeneDB ID:
retro_mputfur_1091
Organism:
Location:
GL897012.1:2256849-2257377 (+)
Status:
KNOWN_PSEUDOGENE
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
72.28 %
Coverage:
53.45 %
Frameshifts:
6
Stop codons:
3


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_1091
GTGAAGATTGGAGTAAATTGATCTGGCCATATTGGTCACCTGCTCACCAGGGGGCCGAAA
TCTGGCAAAGTGGATATTATCACCATACAGTGACTCCTTCATTGACCTCAACTACATGGT
CTACATATTCTGGTATGATTCCATCCACAGCAAATTCAACGGCATTGTTAAAGCTGAGAA
CAGGAAACTTGTCATCAATGGAAAGCCTATCTCTATCTTCCAGGAATGAGATTCTGCCAG
CATAAATAGGGTGATGCTGGTGCTGAGTATGTTGTGGAGCCACTGGAGTCTTTACCATCA
TGGAGAAGGCTGGGGCTCATTTGAAAGGTGGGGCCAAGAGGGTCATCAATCTCTGCCAAC
TTCTGCTGATGCCTCTTTATTTGTGATGATTGTGAACCCTAAGTATGACAACTCCCTCAA
GATTATCAGCAATGGCTCCTGCACTGCCAACTGCTTGGCCCCCTGGCCAAGGTCATCCAT
GACAACTTTGGCAGCATGGAGGAACCCATGACCAGCATGGAGGAACTC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
VKVGVNGFGRIGRLVTRAAFNSGKVDIVAI-NDPFIDLNYMVYMFQYDSTHGKFNGTVKAENGKLVINGKSISIFQERDPANI-KWGDAGAEYVVE-STG
VK.GVN..G.IG.L.TR....SGKVDI..I..D.FIDLNYMVY.F.YDS.H.KFNG.VKAEN.KLVINGK.ISIFQE.D.A.I.K.GDAGAEYVVE..TG
Retrocopy
VKIGVN*SGHIGHLLTRGP-KSGKVDIITI\SDSFIDLNYMVYIFWYDSIHSKFNGIVKAENRKLVINGKPISIFQE*DSASI/K*GDAGAEYVVE/ATG


Parental protein
VFTTMEKAGAHLKGGAKRVI-ISA-PSADAPMFVMGVNHEKYDNSLKIVSNASCTTNCLA-PLAKVIHDNFGIVEGLMTTVHAI
VFT.MEKAGAHLKGGAKRVI.ISA..SADA..FVM.VN..KYDNSLKI.SN.SCT.NCLA.PLAKVIHDNFG..E..MT.....
Retrocopy
VFTIMEKAGAHLKGGAKRVI\ISA\TSADASLFVMIVN-PKYDNSLKIISNGSCTANCLA/PLAKVIHDNFGSMEEPMTSMEEL


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide