RetrogeneDB ID:
retro_mputfur_1097
Organism:
Location:
GL897013.1:3422781-3422955 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
62.07 %
Coverage:
50.88 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
PPDPF
Parental gene aliases:
No gene alias available
Parental gene description:
pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish) [Source:HGNC Symbol;Acc:16142]

Genomic region (view in browser)





>retro_mputfur_1097
AGTGCAGAGTATCCTGGGGAAGTTGCCCCTCGCCACCCCAGGCTCCCCATGGCCCACTTG
GGTTGCTGGTGGGCAAGCTGCTTCCTTCAGAAGTCCACTCTCCCATTCATGGCTGCAGTG
TTGGAGTCCCCAGAACACTCGGAGTCCCCTCCAGCCTCCAGCTCCATGATCTCC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
SAECAGEAIPHPPGLPKADPGHWWASFFFGKSTVPFMATVLESPERSEPPQASSGTIT
SAE..GE..P..P.LP.A..G.WWAS.F..KST.PFMA.VLESPE.SE.P.ASS..I.
Retrocopy
SAEYPGEVAPRHPRLPMAHLGCWWASCFLQKSTLPFMAAVLESPEHSESPPASSSMIS


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide