RetrogeneDB ID:
retro_mputfur_11
Organism:
Location:
GL897655.1:7519-8254 (+)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
70.64 %
Coverage:
70.12 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_11
ATGGTGGACTACTACGAGGTGCTGGGCGTGCCCCGCCAGGCGTCATCAGAGGCCATCAAG
AAGGCATACCGCAAGCTGGCGCTCAAGTGGCACCCCGACAAAAACCCTGAGAACAAGGAG
GAGGCGGAGAGGCGGTTCAAGCAAGTGGCCCAGGCCTACGAGGTCTTGTCAGACACCAAG
AAGAGGGACGTTTACGACCGGTATGGCGAGGCTGGAGTAGAGGGCGGCGGCGGGGGCGGC
GGCGGGGGCAGCGGGCCCTGCCGCGACCCCTTCGAGTATGTCTTCACCTTCCGCGACCCG
GCCGAGGTCTTCAGGGAGTTTTTTGGGGGCCGCGACCCATTTTCGTTCGACTTCTTCGGA
GACCCACTAGAGAACATCATGGGCGGTAGGAGGAGTTCCCGGGGAAGCAGAAGCAGAGGA
ACCGCTCCCTTCTTCTCCGCCTTCAGCGAATTTCCAGCCTTTGGAGGTGGTTTTTCTTCT
TTTGATACGGGATTTAGTTCCTTTGGTTCCCTGGGGAACGGAGGCCTTTCTTCCTTCTCC
ATGTGTTGTGGTAGTGGTGGGACCGGCAACTTCAAATCCATGTCGACTTCCACCGAAATC
GTTAATGGCAAAAAAATCACCACCAAGAAAATCATTGAGAATGGCCAAGAAAGGGTGGAG
GTGGAAGAAGACGGAGAGTTGAAGTCCCTGATAATAAATGGCAAAGAGCAGCTGCTGCGC
ATTGACACCAAGTAA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MVDYYEVLGVQRHASAEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAKKRDI---YDRYGKEGLNGGG--GGIHFDNPFEFGFTFRNP
MVDYYEVLGV.R.AS.E.IKKAYRKLALKWHPDKNPENKEEAER.FKQVA.AYEVLSD.KKRD....Y...G.EG..GGG..G......PFE..FTFR.P
Retrocopy
MVDYYEVLGVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAQAYEVLSDTKKRDVYDRYGEAGVEGGGGGGGGGSGPCRDPFEYVFTFRDP


Parental protein
DDVFREFFGGRDPFSFDFFEDPFEEFFGSRRGPRGSRNRSTGSFFSAFSGFPSFGGGFPAFDSGFTSFASPGHGGLTSFSSAAFGGSGMGNFKSISTSTK
..VFREFFGGRDPFSFDFF.DP.E...G.RR..RGSR.R.T..FFSAFS.FP.FGGGF..FD.GF.SF.S.G.GGL.SFS....G..G.GNFKS.STST.
Retrocopy
AEVFREFFGGRDPFSFDFFGDPLENIMGGRRSSRGSRSRGTAPFFSAFSEFPAFGGGFSSFDTGFSSFGSLGNGGLSSFSMCC-GSGGTGNFKSMSTSTE


Parental protein
MVNGRKITTKRIVENGEERVEVEENGQLKSLTING
.VNG.KITTK.I.ENG.ERVEVEE.G.LKSL.ING
Retrocopy
IVNGKKITTKKIIENGQERVEVEEDGELKSLIING


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide