RetrogeneDB ID:
retro_mputfur_110
Organism:
Location:
GL896949.1:8660232-8660880 (-)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
93.52 %
Coverage:
88.16 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
EIF4E2
Parental gene aliases:
No gene alias available
Parental gene description:
eukaryotic translation initiation factor 4E family member 2 [Source:HGNC Symbol;Acc:3293]

Genomic region (view in browser)





>retro_mputfur_110
GAAGAAAACAGCACACAGAAAGATGGTGTGAAGGAAAAAATGGAACGAGACAAGAATCAG
GGAAGCAGTAAGAGGAAGGCTGTTGTGCCTGGACCAGCAGAGCATCCCCTGCAGTACAAC
TATACTTTCTGGTACTCCAGAAGGACCCCTGGCCGTCCCACCAGCTCACAGAGCTATGAA
CAGAATATCAAACAGATTGGCACCTTTGCCTCCGTGGAGCAGTTCTGGAGGTTTTATAGC
CACATGGTACGTCCCGGGGACCTGACAGGCCACAGTGACTTCCATCTCTTCAAAGAAGGA
ATTAAACCCATGTGGGAGGATGATGCAAATAAAAATGGTGGCAAGTGGATTATTCAGCTG
CGGAAGGGCTTGGCGTCCCGTTGCTGGGAGAATCTTATCCTGGCCATGTTGGGGGAACAG
TTCATGGTTGGGGAGGAGATCTGTGGGGCTGTGGTCTCTGTCCGGTTTCAGGAGGACATT
ATTTCAATATGGAATAAGACTGCCAGTGACCAAGCAACCACAGCCCGAATCCGGGATATG
CTTCGGCAAGTGCTTAATCTACCTCCCAACACCATTATGGAGTACAAAACCCACACCGAC
GGCATCAAAATGCCAGCAGGCTGGGCCCCCAAAGGCTCCTTTTTCAAA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
EENSTQKDGEKEKMERDKNQGSSKRKAVVPGPAEHPLQYNYTFWYSRRTPGRPTSSQSYEQNIKQIGTFASVEQFWRFYSHMVRPGDLTGHSDFHLFKEG
EENSTQKDG.KEKMERDKNQGSSKRKAVVPGPAEHPLQYNYTFWYSRRTPGRPTSSQSYEQNIKQIGTFASVEQFWRFYSHMVRPGDLTGHSDFHLFKEG
Retrocopy
EENSTQKDGVKEKMERDKNQGSSKRKAVVPGPAEHPLQYNYTFWYSRRTPGRPTSSQSYEQNIKQIGTFASVEQFWRFYSHMVRPGDLTGHSDFHLFKEG


Parental protein
IKPMWEDDANKNGGKWIIRLRKGLASRCWENLILAMLGEQFMVGEEICGAVVSVRFQEDIISIWNKTASDQATTARIRDTLRRVLNLPPNTIMEYKTHTD
IKPMWEDDANKNGGKWII.LRKGLASRCWENLILAMLGEQFMVGEEICGAVVSVRFQEDIISIWNKTASDQATTARIRD.LR.VLNLPPNTIMEYKTHTD
Retrocopy
IKPMWEDDANKNGGKWIIQLRKGLASRCWENLILAMLGEQFMVGEEICGAVVSVRFQEDIISIWNKTASDQATTARIRDMLRQVLNLPPNTIMEYKTHTD


Parental protein
SIKMPGRLGPQRLLFQ
.IKMP....P....F.
Retrocopy
GIKMPAGWAPKGSFFK


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide