RetrogeneDB ID:
retro_mputfur_1111
Organism:
Location:
GL897019.1:5921260-5921785 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary

Identity:
97.14 %
Coverage:
55.21 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_1111
CAGGATGAAAGCCATTCGGAGTGGGTATCTTGTGTCCGATTCTCACCCAATAGCAGCAAT
CCCATTATTGTCTCCTGTGGCTGGGACAAGCTGGTCAAGGTATGGAACTTGGCAAACTGC
AAGCTGAAAACCAATCACATCGGCCACACGGGCTACCTGAACACTGTAACTGTCTCTCCA
GATGGATCCCTCTGCGCTTCTGGAGGGAAGGCTGGCCAGGCCATGCTGTGGGATCTCAAC
GAAGGCAAACACCTCTATACACTCGATGGTGGGGACATCATCAATGCTCTGTGCTTCAGT
CCTAACCGATACTGGCTCTGTGCTGCCACAGGCCCCAGCATCAAGATCTGGGACTTGGAA
GGCAAGATCATTGTAGATGAACTAAAGCAAGAAGTTATCAGTACGAGCAACAAGGCAGAG
CCACCTCAGTGTACCTCTCTGGCCTGGTCTGCTGATGGCCAGACTCTGTTTGCTGGCTAC
ACAGACAACCTGGTGCGTGTGTGGCAGGTGACCATCGGCACCCGT


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
QDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALGFS
QDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGK.GQAMLWDLNEGKHLYTLDGGDIINAL.FS
Retrocopy
QDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKAGQAMLWDLNEGKHLYTLDGGDIINALCFS


Parental protein
PNRYGLRAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGTR
PNRY.L.AATGPSIKIWDLEGKIIVDELKQEVISTS.KAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGTR
Retrocopy
PNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSNKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGTR


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide