RetrogeneDB ID:
retro_mputfur_112
Organism:
Location:
GL896942.1:9521649-9522207 (-)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
97.84 %
Coverage:
93.91 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_112
ATGGCTCCCAGTCTTCCGGAAGGTGCTCAGCTTGGGGAAAGCAAACCCTCGCCCTGCTCC
TTTTCCATTGAGAGCATTTTAGGACTGGACCAGAAGAAAGACTGTGTTCCCTCAATGAAA
CCCCACAGGCCCTGGGCCGACACCTGCGGCTCCTCAGGAAAAGATGTTAACCTACGTGTG
CATATCCCAAGCCTTCCCAATGGGATATCCTTCCCTTGTACTGTGGATCACCCAGTGCCA
GAAGAAAGATTTCTGAAATACGAAAATTACTTTTCAGGCTCAGAAAGACTTTCGTTGAAA
AGAGAGCTGAGTTGGTATCGAGGCCAGAGACCCAGAACTGCTTTTACTCAAAACCAGATT
GAAGTGTTAGAAAATGTCTTTAGAGTTAACTGCTATCCTGGTATTGACATCAGAGAAGAC
TTAGCTCGAAAATTGAATCTAGAGGAAGACGGAATCCAGATCTGGTTCCAAAATCGGCGT
GCAAAGCTAAAAAGGTCCCATAGAGAATCACAGTTTCTAATGGCGAAAAAAAATTTCAAC
ACGAATCTCCTGGAATAG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MAPSLPEGARLGESKPSPCSFSIESILGLDQKKDCVPSMKPHRPWADTCGSSGKDVNLRVHIPSLPNGISFPCTVDHPVPEERFLKYENYFSASERLSLK
MAPSLPEGA.LGESKPSPCSFSIESILGLDQKKDCVPSMKPHRPWADTCGSSGKDVNLRVHIPSLPNGISFPCTVDHPVPEERFLKYENYFS.SERLSLK
Retrocopy
MAPSLPEGAQLGESKPSPCSFSIESILGLDQKKDCVPSMKPHRPWADTCGSSGKDVNLRVHIPSLPNGISFPCTVDHPVPEERFLKYENYFSGSERLSLK


Parental protein
RELSWYRGRRPRTAFTQNQIEVLENVFRVNCYPGIDIREDLARKLNLEEDRIQIWFQNRRAKLKRSHRESQFLMAKKNFNTNLLE
RELSWYRG.RPRTAFTQNQIEVLENVFRVNCYPGIDIREDLARKLNLEED.IQIWFQNRRAKLKRSHRESQFLMAKKNFNTNLLE
Retrocopy
RELSWYRGQRPRTAFTQNQIEVLENVFRVNCYPGIDIREDLARKLNLEEDGIQIWFQNRRAKLKRSHRESQFLMAKKNFNTNLLE


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide