RetrogeneDB ID:
retro_mputfur_1124
Organism:
Location:
GL897021.1:4670257-4670499 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
53.66 %
Coverage:
62.31 %
Frameshifts:
1
Stop codons:
0


Parental gene:
Parental gene symbol:
RPS15A
Parental gene aliases:
No gene alias available
Parental gene description:
ribosomal protein S15a [Source:HGNC Symbol;Acc:10389]

Genomic region (view in browser)





>retro_mputfur_1124
GAACACCAGGCTCTTACCAGGTCATGCTCCGAAGTCCTCTCCGGCTTCCGACTGTAACGA
CGAAGCACGGTTACACTGGCGAAGTAGATGCGCCTGATGATTACGGAGCCGGGGAGACGG
CTGTAAACCTTGCCGGCAGGTTACACGAGTGTGCGGGGATGAGCCCCGGCTCTGATCTAC
GACTCAAAGATCTGGAAAAAAGGCAAAATCATCTGCTTCTGTCCCAGCAGTCTGGTTTCA
TA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
KRQVLIRPCSKVI-VRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFI
..Q.L.R.CS.V...R..TV..KHGY.GE....DD..AG...VNL.GRL..C...SP..D..LKDLEK.QN.LL.S.Q.GFI
Retrocopy
EHQALTRSCSEVL/LRLPTVTTKHGYTGEVDAPDDYGAGETAVNLAGRLHECAGMSPGSDLRLKDLEKRQNHLLLSQQSGFI


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide