RetrogeneDB ID:
retro_mputfur_113
Organism:
Location:
GL896942.1:7529314-7529644 (-)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
71.84 %
Coverage:
89.47 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
RPLP1
Parental gene aliases:
No gene alias available
Parental gene description:
ribosomal protein, large, P1 [Source:HGNC Symbol;Acc:10372]

Genomic region (view in browser)





>retro_mputfur_113
GCTCTCCTGCATCTGCTCATGGCCCTCATCCTGCATTGTGATGAGGTGACAATACTGGAG
GATAAGATCGATGCCCTCATTAAAGCAGCAGGTGTAAATGTCAAACATTTACGGCCAGGC
CCTTTGCAAAGACCCTGGCCACAGTCTGTCTATATGGGGAGCCTCATGTGCAATGTAGGA
GCTGGTGGACCCATCCCAGCAGCTGGTGCTATACCAGCAGCAAGTCCTGCTCCTTCCACC
ACTGCTGCCCCAGCTGAGAAGAAAATGGAAGCAAAGAAAGTAGAATCAGAGGAGTCTGAT
GATGACATGGGCTTTGATCTTTTTGACTGA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
ALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALA-NVNIGSLICNVGAGGPAPAAGAAPAGGPAPSTAAAPAEEKKVEAKKEESEESDDDMGFG
ALILH.DEVT..EDKI.ALIKAAGVNV....PG.........V..GSL.CNVGAGGP.PAAGA.PA..PAPST.AAPA.EKK.EAKK.ESEESDDDMGF.
Retrocopy
ALILHCDEVTILEDKIDALIKAAGVNVKHLRPGPLQRPWPQSVYMGSLMCNVGAGGPIPAAGAIPAASPAPSTTAAPA-EKKMEAKKVESEESDDDMGFD


Parental protein
LFD
LFD
Retrocopy
LFD


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide