RetrogeneDB ID:
retro_mputfur_1133
Organism:
Location:
GL897023.1:1805418-1805930 (+)
Status:
KNOWN_PSEUDOGENE
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
93.02 %
Coverage:
97.14 %
Frameshifts:
2
Stop codons:
1


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_1133
ATTCGTCAGAATTATTCCACCTAGGTGGAGGCCGCCGTCAACCGTCTGGTCAAACATGCA
TCTGCGGGCCTCCTACACCTACCTCTCTCTGGGTTTCCATTTCGACCGTGACGATGTGGC
TCTGGAAGGAGTGGGACACTTCTCCCGCGAGTTGGCAGAGGAGAAGCGCGAGGGGGCCGA
GCGTCTCTTGAAGATGCAAAACCAGCGTGGCGGCCGCGCCCTCTTCCAGGACGTCCAGAA
GCCATCCCAAGATGAGTTGGGGGGAAAGCCTGGACGCCATGGAAGCTGCCCTGGTTCTGG
AGAAGAGCCTGAACCAGGCCCTTGTGGAGCTGCACGCCCTGGGTTCTGCCCGCACAGACC
CCCATCTCTGTGACTTTCTGGAGAACCACTTCCTGGATGAGGAGGTGACACTCATCAAGA
AGAAGGGCGACCCCCTGACGAACCTCCGCAGGCTGGCCGGCCCCCAGGCTGGGCTGGGCG
AGTATCTCTTCGAGAGGCTCACCCTCAAGCAC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
IRQNYSTEVEAAVNRLV-NMHLRASYTYLSLGFYFDRDDVALEGVGHFFRELAEEKREGAERLLKMQNQRGGRALFQDVQKPSQDE-WGKTLDAMEAALV
IRQNYST.VEAAVNRLV.NMHLRASYTYLSLGF.FDRDDVALEGVGHF.RELAEEKREGAERLLKMQNQRGGRALFQDVQKPSQDE.WG..LDAMEAALV
Retrocopy
IRQNYST*VEAAVNRLV\NMHLRASYTYLSLGFHFDRDDVALEGVGHFSRELAEEKREGAERLLKMQNQRGGRALFQDVQKPSQDE\WGESLDAMEAALV


Parental protein
LEKSLNQALLDLHALGSARTDPHLCDFLENHFLDEEVKLIKKMGDHLTNLRRLAGPQAGLGEYLFERLTLKH
LEKSLNQAL..LHALGSARTDPHLCDFLENHFLDEEV.LIKK.GD.LTNLRRLAGPQAGLGEYLFERLTLKH
Retrocopy
LEKSLNQALVELHALGSARTDPHLCDFLENHFLDEEVTLIKKKGDPLTNLRRLAGPQAGLGEYLFERLTLKH


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide