RetrogeneDB ID:
retro_mputfur_1135
Organism:
Location:
GL897023.1:3258465-3258852 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
Alignment summary

Identity:
82.17 %
Coverage:
82.69 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
NDUFAB1
Parental gene aliases:
No gene alias available
Parental gene description:
NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1, 8kDa [Source:HGNC Symbol;Acc:7694]

Genomic region (view in browser)





>retro_mputfur_1135
CTGGCCGCAGCCCGGCCGCTCAGCATCACCCTGTGCCCCGCGGGGGCCCGGACGAGGCCT
GGGGCTCCGCCGACAGCCTCGGCGCCTGCGCAGGTCCCGCTGACACAGCTGTGCCGCCAG
TATAGCGACGCACCCCCTCTGACGTTAGAGGGGATCAAGGACCGTGTTCTTTATGTGTTG
AAACTTTATGACAAGATTGACCCAGAAAAGCTCTCGGTAAATTCCCACTTTATGAAAGAC
CTGGGCTTAGACAGTTTGGACCAAGTGGAAATTATCATGGCCATGGAGGATGAATTTGGG
TTTGAAATTCCTGATACAGATGCGGAGAAGTTAATGTGTCCACAAGAAATTGTAGATTAC
ATTGCAGATAAGAAGGATGTATATGAA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
LAAALPGASRVARALDTGPMGGPSPALRGGEVPLTQLGRQYSDAPPLTLEGIKDRVLYVLKLYDKIDPEKLSVNSHFMKDLGLDSLDQVEIIMAMEDEFG
LAAA.P.......A......G.P..A.....VPLTQL.RQYSDAPPLTLEGIKDRVLYVLKLYDKIDPEKLSVNSHFMKDLGLDSLDQVEIIMAMEDEFG
Retrocopy
LAAARPLSITLCPAGARTRPGAPPTASAPAQVPLTQLCRQYSDAPPLTLEGIKDRVLYVLKLYDKIDPEKLSVNSHFMKDLGLDSLDQVEIIMAMEDEFG


Parental protein
FEIPDTDAEKLMCPQEIVDYIADKKDVYE
FEIPDTDAEKLMCPQEIVDYIADKKDVYE
Retrocopy
FEIPDTDAEKLMCPQEIVDYIADKKDVYE


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide