RetrogeneDB ID:
retro_mputfur_1141
Organism:
Location:
GL897024.1:774407-774911 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
76.0 %
Coverage:
63.37 %
Frameshifts:
2
Stop codons:
1


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_1141
AAACCTCACGCAGGGGAGAAGGGTCATGATCCAAAGGAAACTGAGCTGTTGAGAAAACTG
GTTTTTGGTGGTTTGAGCTTTCAAACTACAGATGATAGCTTAAGAGAACATTTTGAAAAA
TGGGGCACACTTACAAATTCTGTGATGATGAGACCTCTGAACAAAACGTTCCAGGGGTTT
TGGTTTTGTGACTTACTCTTGTGTTGAAGAGGTAGTTGCAATAATGTGTGCCCCTCCACA
CAAGGTTGATGGGCGTATAGTGGAAACAAAGAGAGCTGTTTTTATAAAGCCTGGTGCCCA
TCTAACAGTGAAGAAAATTTTCATTGGTGGTATTAAATAAGACACAGAAGAAAATAATGT
GAGAGACTATTTTGAAAAGGATGGCAAGATTGAAACCATAGAAGTTACAGAAGACCGGCA
GAGTAGAAAAAAGAGAGGATCTTCTTTGTAATTTTTAATGATCATGATACAGTCGATAAA
ACTGTTGTTCAGAAATACCACACT


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
KESAGLEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQ-TKRSRGFGFVTYSCVEEVDAAMCARPHKVDGRVVEPKRAVSREDS
K..AG..GHDPKE.E.LRKL..GGLSF.TTDDSLREHFEKWGTLT...VM..P..TKRSRGFGFVTYSCVEEV.A.MCA.PHKVDGR.VE.K....R...
Retrocopy
KPHAGEKGHDPKETELLRKLVFGGLSFQTTDDSLREHFEKWGTLTNS-VMMRPL\TKRSRGFGFVTYSCVEEVVAIMCAPPHKVDGRIVETK----RAVF


Parental protein
VKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFA-FVTFDDHDTVDKIVVQKYHT
.KPGAHLTVKKIF.GGIK.DTEE.N.RDYFEK.GKIETIEV.EDRQS.KKRG...FV.F.DHDTVDK.VVQKYHT
Retrocopy
IKPGAHLTVKKIFIGGIK*DTEENNVRDYFEKDGKIETIEVTEDRQSRKKRGSS/FVIFNDHDTVDKTVVQKYHT


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide