RetrogeneDB ID:
retro_mputfur_1142
Organism:
Location:
GL897024.1:5059131-5059406 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
68.75 %
Coverage:
53.71 %
Frameshifts:
1
Stop codons:
3


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_1142
GCACATGTGCTCTTGAAGATGTAAAACCAGTTCAGCCTCTACACCCTCTCCCAGGATGTG
CAGAAGCCATCTTGAGATGAATGGCATAAAACCTTGGATGCCATGGAAGCTGCCCTGGTT
CTGGAGAACCTGAACCAGGCCCTTTGGGATCTGTATGCCTTGGGTTCAGTCCACACACAC
ACCCATCTCTGTGACTTCCCAACTACTTCCTAGAGGAGCAGGTGAAACTCATCAAGAAGA
TGGGGGACCACCTGTCTAATCTCTGTAGGCTGGCT


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
AERLLKMQNQRGGRALFQDVQKPSQDEWGKTLDAMEAALVLEKSLNQALLDLHA-LG-SARTDPHLCDFLENHFLDEEVKLIKKMGDHLTNLRRLA
A..LLKM.NQ.....L.QDVQKPS.DEW.KTLDAMEAALVLE..LNQAL.DL.A.LG.S..T.P.L...L.N.FL.E.VKLIKKMGDHL.NL.RLA
Retrocopy
AHVLLKM*NQFSLYTLSQDVQKPS*DEWHKTLDAMEAALVLE-NLNQALWDLYA/LGFSPHTHPSL*--LPNYFLEEQVKLIKKMGDHLSNLCRLA


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide