RetrogeneDB ID:
retro_mputfur_1148
Organism:
Location:
GL897026.1:5350860-5351080 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
54.05 %
Coverage:
55.73 %
Frameshifts:
1
Stop codons:
2


Parental gene:
Parental gene symbol:
RPS19
Parental gene aliases:
No gene alias available
Parental gene description:
ribosomal protein S19 [Source:HGNC Symbol;Acc:10402]

Genomic region (view in browser)





>retro_mputfur_1148
GGAGTTCCTGTGGATGACTTGAAGTAGCGGGAGTCCATGAGGACTCTGGCAGCCTTCCTC
AAAAAGTCTGGGAAGTGGGAAGTTCCCTGAAGTGTGGGCACTGTTCAAGTCGGCCAAGCA
CAAAGAGCTTGCTCATTGTGATGAGAACTGGCTCTACGCAGGACCTGCTACCAGAGCACA
TTACTGGAACCTCTGGGGAAGCGCAGCCCAAGGTTGCCTT


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
GVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTV-KLAKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSM
GV.V.D....E..R.LAAFLKKSGK..VP..V.TV.K.AKHKELA..DENW.Y...A..A....L.G.A..G..
Retrocopy
GVPVDDLK*RESMRTLAAFLKKSGKWEVP*SVGTV\KSAKHKELAHCDENWLYAGPATRAHYWNLWGSAAQGCL


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide