RetrogeneDB ID:
retro_mputfur_1149
Organism:
Location:
GL897026.1:5045371-5045755 (-)
Status:
KNOWN_PSEUDOGENE
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
98.44 %
Coverage:
61.65 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
BTF3
Parental gene aliases:
No gene alias available
Parental gene description:
basic transcription factor 3 [Source:HGNC Symbol;Acc:1125]

Genomic region (view in browser)





>retro_mputfur_1149
TCAGCTACAGCAGATGATAAAAAACTTCAGTTCTCCTTAAAGAAGTTAGGAGTAAACAAT
ATCTCTGGTATTGAAGAAGTGAATATGTTCACAAACCAAGGAACAGTGATCCACTTTAAC
AACCCCAAAGTTCAGGCATCGCTGGCAGCGAACACTTTCACCATTACAGGCCATGCTGAG
ACAAAGCAGCTGACAGAAATGCTACCCAGTATCTTAAACCAACTTGGTGCAGACAGTCTG
ACTAGTTTAAGAAGACTGGCTGAAGCTCTGCCCAAACAATCTGTGGATGGAAAAGCACCA
CTTGCTACCGGAGAGGATGATGATGATGATGAAGTTCCAGATCTTGTGGAGAATTTTGAT
GAAGCTTCCAAGAATGAAGCAAAC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
TATADDKKLQFSLKKLGVNNISGIEEVNMFTNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSLRRLAEALPKQSVDGKAP
.ATADDKKLQFSLKKLGVNNISGIEEVNMFTNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSLRRLAEALPKQSVDGKAP
Retrocopy
SATADDKKLQFSLKKLGVNNISGIEEVNMFTNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSLRRLAEALPKQSVDGKAP


Parental protein
LATGEDDDD-EVPDLVENFDEASKNEAN
LATGEDDDD.EVPDLVENFDEASKNEAN
Retrocopy
LATGEDDDDDEVPDLVENFDEASKNEAN


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide