RetrogeneDB ID:
retro_mputfur_115
Organism:
Location:
GL896942.1:9257622-9258369 (-)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
95.73 %
Coverage:
81.53 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_115
ATGGCCTGGTCAATGGGGAAACCAGCCTGCTGGAGCAGGGGCTACCCAGGGACCTCCTAT
CCTGGTGCCTACCCTGGACAGGCCCCTCCTGGCAGTTATCCTGGACAGGCCCCTCCTGGT
GGCTATCCTGGACAGGCCCCTCCTGGCGGCTATCCTGGACAGGCACCTCCAGGAGCCTAC
CCTGGCCCAACAGCTCCTGCTTATCCTGGACCACCTGCACCAGGAGCCTACCCTGGGCAA
CCGAGTGGGCCTGGGGCCTACCCACCTCCTGGACAGCCAAGTGCTCCTGGAGCCCAGCCC
GCTGCTGGCGCCTTTGGCATCCCTGCTGGATCACTGACTGTACCTTATGACCTGCCCTTG
CCTGGAGGAGTCATGCCTCCCATGCTGATAACAATTCTGGGCACAATGAAGCCCAATGCA
AACAGATTTGCTTTAGATTTCAAGAGAGGGAATGATGTTGCTTTCCACTTTAACCCACGC
TTCAATGAGGACAACAAGAGAGTCATTGTTTGCAATACAAAGCTGGATAACCTCTGGGGA
AAGGAAGAAAGACAGGCGACTTTCCCATTCGAAACTGGTAAACCATTCAAAATACAAGTG
CTGGTTGAATCTGACCACTTCAAGGTTGCGGTCAATGATGCTCATTTGTTGCAGTACAAT
CATCCGATGAAAAATCTCCAGGAAATCAGCAAACTGGGAATTTCTGGTGACATAGATCTC
ACCAGTGCTTCACATGTTATGATATAA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
YPGQAPPGGYPGQAPPGGYPGQAPPGAYPGQAPPGGYPGQAPPGAYPGPTAPAYPGPPAPGAYPGQPSGPGAYPPPGQPSAPGAQPAAGAFGIPAGPLTV
YPG...PG.YPGQAPPG.YPGQAPPG.YPGQAPPGGYPGQAPPGAYPGPTAPAYPGPPAPGAYPGQPSGPGAYPPPGQPSAPGAQPAAGAFGIPAG.LTV
Retrocopy
YPGTSYPGAYPGQAPPGSYPGQAPPGGYPGQAPPGGYPGQAPPGAYPGPTAPAYPGPPAPGAYPGQPSGPGAYPPPGQPSAPGAQPAAGAFGIPAGSLTV


Parental protein
PYDLPLPGGVMPRMLITILGTTKPNANRFALDFKRGNDVAFHFNPRFNEDNKRVIVCNTKLDNLWGKEERQATFPFETGKPFKIQVLVESDHFKVAVNDA
PYDLPLPGGVMP.MLITILGT.KPNANRFALDFKRGNDVAFHFNPRFNEDNKRVIVCNTKLDNLWGKEERQATFPFETGKPFKIQVLVESDHFKVAVNDA
Retrocopy
PYDLPLPGGVMPPMLITILGTMKPNANRFALDFKRGNDVAFHFNPRFNEDNKRVIVCNTKLDNLWGKEERQATFPFETGKPFKIQVLVESDHFKVAVNDA


Parental protein
HLLQYNHRMKNLQEISKLGISGDIDLTSASHVMI
HLLQYNH.MKNLQEISKLGISGDIDLTSASHVMI
Retrocopy
HLLQYNHPMKNLQEISKLGISGDIDLTSASHVMI


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide