RetrogeneDB ID:
retro_mputfur_116
Organism:
Location:
GL896916.1:7096358-7096823 (+)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
55.84 %
Coverage:
98.71 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
BC048502
Parental gene aliases:
No gene alias available
Parental gene description:
cDNA sequence BC048502 [Source:MGI Symbol;Acc:MGI:2652828]

Genomic region (view in browser)





>retro_mputfur_116
ATGGAACCCGAAGCCTTAGAAATCTGCCCTTACAACCCTCACCACCGAGTCCCACTCAGC
AGATTTCAGTACCACCTGGCTTCGTGCAGGAGGAAGAACCCCAAGAAGGCCAAAAAGATG
GCCAGCTGCAAATACAATGCCTGCCACGTGGTCCCCATCAAGAAGCTGGAGGAACACGAG
GCGGCCTGCGTGAACAGAAGCTCCGTGGAGGAGGAGTTCGGCTTGCGCCCCTTGAAAGCT
AGCCTTCCAAGTTCAGAGCAGAATGGAAATGCCCTTCCAGGGCCCCCCTGGCTCCCCAGT
TCTGATGTCTGGAATGTCGACGGCACTAATTGCCATCCCATGTTTGTCCTTAAGACTTTT
GTTCCCCAAAAGCTTGTCTGTGAAAGCGATACAAGAGAGTCAGAGAGAGAAGCCCACCCC
CCGCCCCTGACCACCCCCCAGAAGACCCTCAGACCAGGAGAGTAA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MEPEDLEICPYDPNHRMPASRLQYHLASCRKKNPKIAKKMANCKYNACHVVPIKRLKEHEANCVNRTAVDDEPFNLP-KVISPSLEPNEKLSNAANQILD
MEPE.LEICPY.P.HR.P.SR.QYHLASCR.KNPK.AKKMA.CKYNACHVVPIK.L.EHEA.CVNR..V..E....P.K...PS.E.N............
Retrocopy
MEPEALEICPYNPHHRVPLSRFQYHLASCRRKNPKKAKKMASCKYNACHVVPIKKLEEHEAACVNRSSVEEEFGLRPLKASLPSSEQNGNALPGPPWLPS


Parental protein
PDVWNIDNTHHSPSFVLKTFAPKTLVCESDSRDIKKQSMDGKHPNNYKSWRKGQ
.DVWN.D.T...P.FVLKTF.P..LVCESD.R...............K..R.G.
Retrocopy
SDVWNVDGTNCHPMFVLKTFVPQKLVCESDTRESEREAHPPPLTTPQKTLRPGE


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide