RetrogeneDB ID:
retro_mputfur_117
Organism:
Location:
GL896969.1:579869-582203 (-)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
97.35 %
Coverage:
61.61 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_117
ATGAGTCTGCAGATCTACAATGATGAAAACGTCACTGGTGACAAAAGTGCAGAGAACTGT
GAGTTCCTGTTTTCACCGCCGGGACTATCTGTTCTTCGTCTGTCACAGAAAGAAAATGTG
CCACCCAAAAGCGTACTCAAAACTATGAAAGTGACTTTCCAGACTCCTCTGCGGGACCCA
CAGACACACCGGATATTGAGTCCTAGCATGAGCAGCAAGCTCGAGGCTCCTTTTGCTCTG
GAGGATACTGTTGGCTTAGAAAATTCTCCTCAAAACCAGACCCAGAAAGAGAACCAACAG
TTCACCAAGGAAGTGGACACCAAAATGACCAATGGAATTCTCCACAAACCAATGATGGCC
AATGCCATCCCCGCTCCAGCAGATGTGAGAGCAACCCCTGAAGATTGGCAGCATTCCAGT
GGGCCCACCTCAGCTCACCTGGCCAGTCTGGATCCCTCAAGCTCTCCCCAGATGCCAAAA
CGTCTTGAAAATCAAGTGGCTTCTCTAGGACAAATGACTGTGAGCCCCGAGCAAGCCTTG
GAGGAAAGTGTTCATTCTTATTTCTCAGAAAAGAGTATTCCCTCCACCTTGGAAATCACA
GAAGACCCTTCCCAGATGGCTACCCCAGACCAAACAGAAGACCCTCCCGAAGCCACCAGA
GAAAGCCCAAACTGGGTGGCTGCTTTGTCCCCTATGACTCACCCTGCAGGAGCAGGTGGA
GAAGGGTCCCCTGTAGACCTGCCTGAAGAGCCCTCAGGTCCTGAAGATGCCACACTGGCC
AGCCATCTGAAGGCTGGAGGGGCCACAGCCCCAAGTCCTCAGAAGAAAGAAGCTGATGGC
CAGAGAGCCACCTCGTGGAATGGCAGGCCCATAGAGCTAGAATTTGATTTATCTGACAAT
ACTACCAGCAAAACATTGCCTGCACTGAGGGAATTGGGGACGAGACCTAGCCCTAAACCT
TCCCCTAGGATGTCAGAACCACGGCAAGAAAAGGCCCCTGAGGAGGCCAGTGAGGGGCCC
CTTCCCCTGCCCCGGAGGTCTTCCAGCCTGGACTGGAACAATCTGGATGACCCAATCTTT
AACCCATTTGAAGGAGGAGAGGCCCAGCCCTCAGAATGCCCACAGAGCAGGCCAGCCGGG
CCTGTGGCCAAGGAGGTGTCTGCTAGTCCCGAGGCCACGGGGCCCTCCTCTCCAAGCCTG
CAGGTGCCTTCATTCTCCTCGGATGACACGCCTGGGGTGCAGACCGCAGCCAGGACCCCA
GGTGAAGCAGTCAAGGAGGGAGCTGCGGACCCTGCAGGTGCACCAACCTCCAGGGGTGGC
CTGGGCGGTGAGCCAGCACCCCCCACTCCACAGGACCTGGAGCCCACCGCAGAGCTGGCT
GAGGAGCAGTTCCGAGACCCCACTGAGGTTCTAGGCTCTGGAGCTGAGGTGGATTATCTG
GAGCAGTTTGGGGGTTCCTCGTTTAAGGAGTCAGCCCTGAGAAAACAGTATTTGTACCTC
AAGTTTGACCCGCTCCTAAAGGACAGCCCTCAGAGACCAGGGCCTGTGGCTCCAGAGACC
AGCAGTGCACAGGATGTGGCCGTGCCTTCCTCAGGAAACTTGCCAGAGGCGAAGCTCGTG
GAACTTGACTTCCTGGGACCCCCAGATGCTCCCATGCTGGATCCCCCTCCCTGTGTCTTT
GGGCCTGGGGGGCCACCACTGTCCATGGGCTCCATCGTGGACGTGTTGCAGTACAGCCAG
AAGGACCTGGACGCAGTGGTGGAGACCACACGCGAGGAGAACGTGCTGCTGAGGAGCCAG
TGTGAGACACTGCGCGCCAGGAACCTGGAGATGGGGAAGATCATGGATGGCTTTGAGGGA
ATCGTGTACCAGGCGATGGAGGAGGCTCAGAAGCAGAAGGAACTTGCAAAAGCAGAGATC
CAGAAGATCCTAAAGGAAAAAGAGCAGCTGACTGCAGACCTGAGCTCCATGGAAAAGTCT
TTCTCTGACCTCTTCAAACGGTTTGAGAAACAGAAGGAGGTGATTGAGGGTTACCGCAAG
AATGAAGAGTTGCTGAAGAAGTGTGTGGAGGGTTACATTGCAAGGATAGAAAAGGAGGGC
CAGCGGTACCAGGCCCTGAAGGCCCATGCGGAGGAGAAGCTCCAACTGGCTAGCGAGGAG
ATTGCCCAGGTGCGCAGCAAGGCCCAAGCAGAGTCCTTGGCCTTCCAGGCCAGCCTGAGG
AAGGAGCAGATGCGCATCCACTCACTGGAGAAGACAGTGGAGCAAAAGACTAAGGAAAAT
GAGGAACTGACCCGGATCTGTGATGACCTCATCTCCAAGATGGAGAAGATCTGA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
PEEPSGPGDATLASHLKAGGATPPSPQKKEADGQRATSWNGRPIELEFDLSDNTTSKTLPALRELGTRPSPKPSPRMSEPRQEKAPEEASEGPLPLPRRS
PEEPSGP.DATLASHLKAGGAT.PSPQKKEADGQRATSWNGRPIELEFDLSDNTTSKTLPALRELGTRPSPKPSPRMSEPRQEKAPEEASEGPLPLPRRS
Retrocopy
PEEPSGPEDATLASHLKAGGATAPSPQKKEADGQRATSWNGRPIELEFDLSDNTTSKTLPALRELGTRPSPKPSPRMSEPRQEKAPEEASEGPLPLPRRS


Parental protein
SSLDWNNLDDPIFNPFEGGEAQPSECPQSRPAGPVAKEVSASPEATGPSSPSLQVPSFS-DDTPGVQTAARTPGAAVKEGAADPAGAPTSRGGLGGEPAP
SSLDWNNLDDPIFNPFEGGEAQPSECPQSRPAGPVAKEVSASPEATGPSSPSLQVPSFS.DDTPGVQTAARTPG.AVKEGAADPAGAPTSRGGLGGEPAP
Retrocopy
SSLDWNNLDDPIFNPFEGGEAQPSECPQSRPAGPVAKEVSASPEATGPSSPSLQVPSFSSDDTPGVQTAARTPGEAVKEGAADPAGAPTSRGGLGGEPAP


Parental protein
PTPQDLEPTAELAEEQFRDPTEVLGSGAEVDYLEQFGGSSFKESALRKQSLYLKFDPLLKDSPQRPGPVAPETSRGLSAQDVAVPSSGNLPEAKLVELDF
PTPQDLEPTAELAEEQFRDPTEVLGSGAEVDYLEQFGGSSFKESALRKQ.LYLKFDPLLKDSPQRPGPVAPETS...SAQDVAVPSSGNLPEAKLVELDF
Retrocopy
PTPQDLEPTAELAEEQFRDPTEVLGSGAEVDYLEQFGGSSFKESALRKQYLYLKFDPLLKDSPQRPGPVAPETS---SAQDVAVPSSGNLPEAKLVELDF


Parental protein
LGPPDAPMLDPPPCVFGPGGPPLSMGSIVDVLQYSQKDLDAAVETTREENVLLRSQCETLRARNLEMGKIMDGFEGIVYQAMAQEEAQKQKELAKAEIQK
LGPPDAPMLDPPPCVFGPGGPPLSMGSIVDVLQYSQKDLDA.VETTREENVLLRSQCETLRARNLEMGKIMDGFEGIVYQAM..EEAQKQKELAKAEIQK
Retrocopy
LGPPDAPMLDPPPCVFGPGGPPLSMGSIVDVLQYSQKDLDAVVETTREENVLLRSQCETLRARNLEMGKIMDGFEGIVYQAM--EEAQKQKELAKAEIQK


Parental protein
ILKEKEQLTADLSSM
ILKEKEQLTADLSSM
Retrocopy
ILKEKEQLTADLSSM


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide