RetrogeneDB ID:
retro_mputfur_1182
Organism:
Location:
GL897037.1:847248-847537 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
74.23 %
Coverage:
70.59 %
Frameshifts:
1
Stop codons:
3


Parental gene:
Parental gene symbol:
RPL27
Parental gene aliases:
No gene alias available
Parental gene description:
ribosomal protein L27 [Source:HGNC Symbol;Acc:10328]

Genomic region (view in browser)





>retro_mputfur_1182
GCTCTGGTGGCTGGAACTGACTGCTATCCCTGCAAAGTGACAGCTGCCGTGGATGAGAAG
ATATTTGCCAAGAGGTCAAAGATCAAATCTTTTGTGAAAGTTTATAACTACAATCACTTC
ATGCCCACAAATGTACTCTGTGGATATCCCTTTGGACAAAAGTGTTGTCAACAAGGATGT
CTTCAGAGACATAGCTCTTCAATGTAAGGTCTGATGAGAGGCCAGAGTCAAGTTGGAGGA
GAAGTATAAGACTGACAAGAACAAATGGTTCTTCTAGAATCTGTGGTTT


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
ALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTR-YSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF
ALVAG.D.YP.KVTAA...K..AKRSKIKSFVKVYNYNH.MPT..YSVDIPLDK.VVNKDVFRD.AL..K...EA.VK.EE.YKT.KNKWFF..L.F
Retrocopy
ALVAGTDCYPCKVTAAVDEKIFAKRSKIKSFVKVYNYNHFMPTN\YSVDIPLDKSVVNKDVFRDIALQCKV**EARVKLEEKYKTDKNKWFF*NLWF


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide