RetrogeneDB ID:
retro_mputfur_1188
Organism:
Location:
GL897038.1:3526721-3527076 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
55.28 %
Coverage:
100.0 %
Frameshifts:
4
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_1188
GCTTTTAAGGACACCAGAAAGACACCCCTGGAGCCAGTGAGGGGAAATTCACCAAACTAG
AGCCACACGAGCCAGCCACTGTGGAAAACTCCTGCAGAACATGTCATCAGACTTGACTGG
AGGCACAAATCAAAGGAAAAGAAGCTCAAAGGAAAAAAACTTAGACTTCCACCAAGACTC
TTAGGATCACTTCGAGAAAAACCTTTCGTGCTGGAGGTTCTAGGGTTTGGGATTATTTCC
AGATGAGAATCCACAAGCAATCATGGATTTGGTCATTTCTTCCAAGATTGTTCAGCAGAT
TATTTCCATCAGTATTGAGCCAGGAATGCAGGTTGGAGTCACTATTGCTGGTGCT


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
AFKDTGKTPVEPEVA-IHRIRITLTSRNVKSLEKVCADLIRGA-KEKNLKVKGP-VRMP-TKTLRITTRKTPCGEGSKTWDRFQMRIHKR-LIDLHSPSE
AFKDT.KTP.EP....IH..R.T..S...K.L.....DL..G..K.K..K.KG...R.P.TKTLRIT.RKT....GS..WD.FQMRIHK....DL...S.
Retrocopy
AFKDTRKTPLEPVRG\IHQTRATRASHCGKLLQNMSSDLTGGT/KSKEKKLKGKKLRLP/TKTLRITSRKTFRAGGSRVWDYFQMRIHKQ/IMDLVISSK


Parental protein
IVKQITSISIEPGVEVEVTIADA
IV.QI.SISIEPG..V.VTIA.A
Retrocopy
IVQQIISISIEPGMQVGVTIAGA


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide