RetrogeneDB ID:
retro_mputfur_119
Organism:
Location:
GL896951.1:10329237-10330230 (+)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
98.19 %
Coverage:
100.0 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_119
ATGGTGACTGGACAGAAGTTGATGAGAGAGATTCGAGTTTTTGAATTTGGTGGACCAGAA
GTGCTGAAACTCCAGTCGGATATTGCAGTACCAATTCCAAAAGACCATCAGGTTCTAATC
AAAGTCCACGCATGTGGTATAAACCCAGTGGAAACATACATTCGTTCTGGTACTTACAGT
AGAAAACCGCTCTTACCCTATACTCCTGGTTCCGATGTGGCTGGCATAGTAGAAGCCGTT
GGAGATAATGTATCCACTTTCAAGAAAGGTGACAGGGTTTTCACTACTAGCACCATCTCG
GAGGGCTATGCCGAGTATGCTCTAGCAGACGATCACACCGTTTACACACTACCAGGAAAA
CTGGACTTGAAGCAAGGAGCTGCCATTGGTATTCCCTATTTTACTGCTTACCGAGCCCTG
CTCCACAGTGCCCATGTGAAAGCTGGAGAAAGTGTTCTGGTTCATGGGGCTAGTGGAGGA
GTTGGACTAGCAGCATGCCAAATTGCCAGAGCTTACGGCTTAAAGGTTTTGGGCACAGCT
GGTACTGAGGAAGGGCAAAACACTGTTTTGCAAAATGGAGCCCATGAAGTGTTCAATCAC
AGAGAACCTAATTATATTGAAAAAATTAAGAAATCTGTTGGTGAAAAAGGAATTGATGTG
ATCATTGAAATGTTAGCTAATGTAAATCTTAGTAATGATTTGAATCTTCTGTCATATGGA
GGACGAGTAATAGTTGTTGGCAGCAGAGGTCCTATTGAAATAAACCCACGGGACACCATG
GCAAAGGAATCTAGTATAATTGGAGTTGCTCTGTATTCATCAACCAAGGAGGAGTTTAGG
CAATTTGCAGCGGCCCTTCAAGCTGGAATGGAAATTGGTTGGTTGAAACCTGTAATAGGT
TCTCAGTATTCGCTGGAGAAGGTGGCCCAGGCTCACAAAAATATCATCCATAACAGTGGA
ACTAGTGGGAAAATGATTCTTCTCTTAGAATGA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MATGQKLMRAIRVFEFGGPEVLKLQSDIAVPIPKDHQVLIKVHACGINPVETYIRSGTYSRKPLLPYTPGSDVAGIVEAVGDNVSTFKKGDRVFTTSTIS
M.TGQKLMR.IRVFEFGGPEVLKLQSDIAVPIPKDHQVLIKVHACGINPVETYIRSGTYSRKPLLPYTPGSDVAGIVEAVGDNVSTFKKGDRVFTTSTIS
Retrocopy
MVTGQKLMREIRVFEFGGPEVLKLQSDIAVPIPKDHQVLIKVHACGINPVETYIRSGTYSRKPLLPYTPGSDVAGIVEAVGDNVSTFKKGDRVFTTSTIS


Parental protein
GGYAEYALADDHTVYTLPGKLDLKQGAAIGIPYFTAYRALLHSARVKAGESVLVHGASGGVGLAACQIARAYGLKVLGTAGTEEGQNIVLQNGAHEVFNH
.GYAEYALADDHTVYTLPGKLDLKQGAAIGIPYFTAYRALLHSA.VKAGESVLVHGASGGVGLAACQIARAYGLKVLGTAGTEEGQN.VLQNGAHEVFNH
Retrocopy
EGYAEYALADDHTVYTLPGKLDLKQGAAIGIPYFTAYRALLHSAHVKAGESVLVHGASGGVGLAACQIARAYGLKVLGTAGTEEGQNTVLQNGAHEVFNH


Parental protein
REPNYIEKIKKSVGEKGIDVIIEMLANVNLSNDLNLLSYGGRVIVVGSRGPIEINPRDTMAKESSIIGVALYSSTK
REPNYIEKIKKSVGEKGIDVIIEMLANVNLSNDLNLLSYGGRVIVVGSRGPIEINPRDTMAKESSIIGVALYSSTK
Retrocopy
REPNYIEKIKKSVGEKGIDVIIEMLANVNLSNDLNLLSYGGRVIVVGSRGPIEINPRDTMAKESSIIGVALYSSTK


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide