RetrogeneDB ID:
retro_mputfur_1192
Organism:
Location:
GL897039.1:30841-31127 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
69.61 %
Coverage:
50.78 %
Frameshifts:
4
Stop codons:
2


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_1192
CAGACCCAGATTGAAGTGTTCTTTCTGCCTCTGCCCTGATTATCAAAGCCCTCAAGGAAC
TGCCAAGAGACAGGAGGAAACAGAAAAGTGCACAAGCACAGTGGAAATACCACTTTCGAT
GAGCTTTTCAACATTTCCTGACAGATGTGGCACCACTCTTGAGTCAGAGAACTCTCTGGC
ACCATTAAAGAGATCCTGGGGACTACCAGTCTATGGGCTGCAATACTGATGCCGCCAACC
TCATGACATCATAGATGGCATCAATAGTGGTGCAGTGGAATGCCCA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
QAQIEV-VPSASALIIKALKEPPRDRKKQKNSAV-KHSGNITFDEIVNIARQMRHRSLARELSGTIKEILGTA-QSVGCNVDG-RHPHDIIDDINSGAVE
Q.QIEV.V.SASALIIKALKE.P..R...K.....KHSGN.TFDE..NI..QM.H.S..RELSGTIKEILGT..QS.GCN.D..R.PHDIID.INSGAVE
Retrocopy
QTQIEV/VLSASALIIKALKELP--RDRRKQKSA\KHSGNTTFDELFNIS*QMWHHS*VRELSGTIKEILGTT/QSMGCNTDA/RQPHDIIDGINSGAVE


Parental protein
CP
CP
Retrocopy
CP


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide