RetrogeneDB ID:
retro_mputfur_1198
Organism:
Location:
GL897040.1:2386713-2387211 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
55.17 %
Coverage:
51.35 %
Frameshifts:
3
Stop codons:
2


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_1198
GGTGATGTTGATGCTGAATATGTTGTGGAGTCCATTGGTGTCTTCACCTCCATTGGGAAA
GCTGGGGCTCACTTGAAGGTGGGGCCAAGAGGGTCATCATCTCTGCTTCTTCTGCTGATG
TCTTCATGTTTGTGATGGGTATGGACCATGAAAAGTATAACAATTCCCCAAGATTGTCAG
CAATGACTCCTGCACAACCAACTCTGTGGCCCTTCTGGCTGCAGTCATCCATGACTTTTG
CATCATAGAGGACCTCATGACCACAGTCCATCACTGCCTCATAAGTGTTGTGGATGGCCC
CTCTGGAAAGCTGTGGTGTGATGAACAAGGGGATGACCACATTGTCCCTATTTCTACTGG
TGCTGCCAAGGCTGTGAGCAGTTATTCCTGAGTTGAACGGGAAGCTCACTGGCATGGCCT
TACATGTTCCCACCCCCAGTGTGTGTGCTACATGGAGAAAGCTGCCAAATACAATGACAT
AAAGAATACAGTGAAGTA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
GDAGAEYVVESTGVFTTMEKAGAHLK-GGAKRVIISAPSADAPMFVMGVNHEKYDNS-LKIVSNASCTTNCLAPLAKVIHDNFGIVEGLMTTVHAITATQ
GD..AEYVVES.GVFT...KAGAHLK.GGAKRVIISA.SAD..MFVMG..HEKY.NS..KIVSN.SCTTN..A.LA.VIHD.F.I.E.LMTTVH......
Retrocopy
GDVDAEYVVESIGVFTSIGKAGAHLK/GGAKRVIISASSADVFMFVMGMDHEKYNNS/PKIVSNDSCTTNSVALLAAVIHD-FCIIEDLMTTVHHCLIS-


Parental protein
KTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVG-KVIPELNGKLTGMAFRVPTPNVSVVDLTCRLEKAAKYDDI
..VDGPSGKLW.D..G....I.P.STGAAKAV.........G.........P.P........C.......Y...
Retrocopy
-VVDGPSGKLWCDEQG-DDHIVPISTGAAKAVS/QLFLS*TGSSLAWPYMFPPPVCVLHGESCQIQ*HKEYSEV


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide