RetrogeneDB ID:
retro_mputfur_120
Organism:
Location:
GL897093.1:296371-297421 (+)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
98.67 %
Coverage:
65.89 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_120
GCGGCGGCGACGGCGGCGGAGGCTGTGGCCTCCGGCTCTGGAGAACCCCGAGAAGAGGCC
GAAGCTCCGGGCCTCGCCTGGGATGAGTCCCAGCTGCGTAGTTATAGCTTTCCGACTCGG
CCCATCCCCCGTCTGAGTCAGAGCGACCCCCGGGCGGAGGAGCTTATCGAGAATGAGGAG
CCTGTGGTGCTGACAGACACAAATCTTGTGTATCCTGCTCTGAAATGGGACCTCGAATAC
CTGCAGGAGAACATTGGCAACGGAGACTTCTCTGTGTACAGTGCCAGCACCCACAAGTTC
TTGTACTATGATGAGAAGAAGATGGCCAATTTCCAGAACTTTAAGCCCAGGTCCAACAGG
GAGGAAATGAAATTTCACGAGTTTGTTGAGAAACTGCAGGATATACAGCAGCAAGGAGGG
GAAGAGAGGTTGTATCTGCAGCAAACGCTCAATGACACTGTGGGCAGGAAGATCGTCATG
GACTTCTTGGGTTTTAACTGGAACTGGATTAATAAGCAACAGGGAAAGCGTGGCTGGGGA
CAACTGACATCCAACCTACTGCTCATTGGCATGGAAGGAAATGTGACACCTGCTCACTAT
GATGAGCAGCAGAACTTCTTTGCTCAGATAAAAGGCTACAAGCGATGCATTTTATTCCCT
CCGGATCAGTTTGAGTGCCTGTACCCATATCCTGTTCATCACCCATGTGACAGACAGAGC
CAGGTGGACTTTGACAATCCTGACTACGAGAGGTTCCCCAATTTCCAGAACGTGGTTGGT
TATGAAACAGTGGTTGGCCCTGGTGATGTTCTTTACATCCCAATGTACTGGTGGCATCAC
ATAGAGTCATTACTAAATGGGGGGATTACCATCACTGTGAACTTCTGGTATAAGGGGGCC
CCCACCCCTAAGAGAATTGAATATCCTCTCAAAGCCCATCAGAAAGTGGCCATAATGAGA
AACATTGAGAAGATGCTTGGAGAGGCCTTGGGGAACCCACAAGAGGTGGGGCCCTTGTTG
AACACAATGATCAAGGGTCGATACAACTAG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
AAATAAEAVASGSGEPREEAEAPGLAWDESQLRSYSFPTRPIPRLSQSDPRAEELIENEEPVVLTDTNLVYPALKWDLEYLQENIGNGDFSVYSASTHKF
AAATAAEAVASGSGEPREEAEAPGLAWDESQLRSYSFPTRPIPRLSQSDPRAEELIENEEPVVLTDTNLVYPALKWDLEYLQENIGNGDFSVYSASTHKF
Retrocopy
AAATAAEAVASGSGEPREEAEAPGLAWDESQLRSYSFPTRPIPRLSQSDPRAEELIENEEPVVLTDTNLVYPALKWDLEYLQENIGNGDFSVYSASTHKF


Parental protein
LYYDEKKMANFQNFKPRSNREEMKFHEFVEKLQDIQQQGGEERKHRLYLQQTLNDTVGRKIVMDFLGFNWNWINKQQGKRGWGQLTSNLLLIGMEGNVTP
LYYDEKKMANFQNFKPRSNREEMKFHEFVEKLQDIQQQGGEER...LYLQQTLNDTVGRKIVMDFLGFNWNWINKQQGKRGWGQLTSNLLLIGMEGNVTP
Retrocopy
LYYDEKKMANFQNFKPRSNREEMKFHEFVEKLQDIQQQGGEER---LYLQQTLNDTVGRKIVMDFLGFNWNWINKQQGKRGWGQLTSNLLLIGMEGNVTP


Parental protein
AHYDEQQNFFAQIKGYKRCILFPPDQ
AHYDEQQNFFAQIKGYKRCILFPPDQ
Retrocopy
AHYDEQQNFFAQIKGYKRCILFPPDQ


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide