RetrogeneDB ID:
retro_mputfur_121
Organism:
Location:
GL897004.1:2068652-2069057 (-)
Status:
KNOWN_PROTEIN_CODING
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
74.07 %
Coverage:
100.0 %
Frameshifts:
0
Stop codons:
0


Parental gene:
Parental gene symbol:
RPL32
Parental gene aliases:
No gene alias available
Parental gene description:
ribosomal protein L32 [Source:HGNC Symbol;Acc:10336]

Genomic region (view in browser)





>retro_mputfur_121
ATGGCTGCCTTCAGACTTCTGGTGAAGTACAAAATCATAAAAAAGAGAACCAAGAGGTTC
ATCCGGAACTCGTCAGACCAATATGTCCAAATTAAGCACAACTGGTGGAAACCCAGAAGC
ATTGACAATAGGGTGTACAGAAGATTCAGGAGCCAGATCTTGATGCCCAACATTGGTTAC
GGAAGCAACAAGACAACAAAGCGCATGTTGCCCAGTGGCTTCCGGAAGTTCCTACTCCAC
AATGTCAAGGAGCTTGAAGTGCGGTTGATGTACAATAAAGCTGACTGTGCAGAGACTGCT
CACAATGTCTCCTCCAAGAACCACAAAGATGTGGACAAAACAGCCCAGCTGGCAACCAGA
GTCACCAGTCCCCACGCCGGGCTGTGCAATGAAGAAAATGAATAG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MAALRPLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGSNKKTKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIA
MAA.R.LVK.KI.KKRTK.FIR..SD.YV.IK.NW.KPR.IDNRV.RRF..QILMPNIGYGSNK.TK.MLPSGFRKFL.HNVKELEV.LM.NK..CAE.A
Retrocopy
MAAFRLLVKYKIIKKRTKRFIRNSSDQYVQIKHNWWKPRSIDNRVYRRFRSQILMPNIGYGSNKTTKRMLPSGFRKFLLHNVKELEVRLMYNKADCAETA


Parental protein
HNVSSKNRKAIVERAAQLAIRVTNPNARLRSEENE
HNVSSKN.K..V...AQLA.RVT.P.A.L..EENE
Retrocopy
HNVSSKNHKD-VDKTAQLATRVTSPHAGLCNEENE


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide