RetrogeneDB ID:
retro_mputfur_1215
Organism:
Location:
GL897044.1:2406561-2407135 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
64.95 %
Coverage:
98.96 %
Frameshifts:
3
Stop codons:
3


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_1215
ATCCTGCTGGCTGACCAGGGCCAGAACTGGAAGAAGAGGTGGTGACCAACAAGACCTGCC
TGTAGGGCTCACTCAAGCCCTCCTGTCTACCAGGGAATTTTTCTGAATTCCAAGATGGAG
ACCTTAACCCTGTACAAGTCCAAGGCCATCCTGCAATACCTGGACTACTCTCTTGGGCTT
AGTGGGAAGGACCAGAGGGAGGCCGCCTTGGTGGATGTGGTGAATGGCTCCATGGAGGAT
CTCTGTTGCAAATACCTCGTCTTCATCTATGCCAACCCCACGGCAGGCAAGGAGGGGTTT
ATGAAGGCACGACTGGGGTACCTGAAGCCTTTTGAGTTCCTGCTGTCCTAGGACCAGGGA
GGGACAGGTCTTCATCGTAGGCAACTGGATCTCCTTCTTGGACTACACATTGCTGAACTT
GCTGCTGATTCACCAGGTCCTAGAACCCCACTGCCTGGACTCTTTCCCCCTGCTCTCTGC
CTATGTGGCGTGCCTCAGTCCTGTGCAGGAGCTCAAGTCCTTCCTGGCCTCCCCCTAGCA
TGTGAAGATCCCTATCAACCACACCAGGAAGCAG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MLLADQGQSWK-EEVVTKETWLQGPLKASCLYGQLPKFQDGDL-TLYQSNAILRHLGRSLGLYGKDQREAALLDVVNDGVEDLRCKYVMLIYTNYEAGKE
.LLADQGQ.WK.EEVVT..T.L.G.LK.SCL.G....FQDGDL.TLY.S.AIL..L..SLGL.GKDQREAAL.DVVN...EDL.CKY...IY.N..AGKE
Retrocopy
ILLADQGQNWK/EEVVTNKTCL*GSLKPSCLPGNFSEFQDGDL\TLYKSKAILQYLDYSLGLSGKDQREAALVDVVNGSMEDLCCKYLVFIYANPTAGKE


Parental protein
EYLKALPECLKPFEMLLSQNEGG-QAFIVGSQISFADYNLLDLLLIHQVLSPSCLDSHPLLLAYVKRLSARPKLKAFLASPEHVNRPINGNGKQ
...KA....LKPFE.LLS...GG.Q.FIVG..ISF.DY.LL.LLLIHQVL.P.CLDS.PLL.AYV..LS....LK.FLASP.HV..PIN...KQ
Retrocopy
GFMKARLGYLKPFEFLLS*DQGG\QVFIVGNWISFLDYTLLNLLLIHQVLEPHCLDSFPLLSAYVACLSPVQELKSFLASP*HVKIPINHTRKQ


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide