RetrogeneDB ID:
retro_mputfur_1216
Organism:
Location:
GL897044.1:1783-2115 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
57.76 %
Coverage:
64.57 %
Frameshifts:
3
Stop codons:
1


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_1216
GCACCAAGTCTCTTGAAGAGGCAAAACCAGCAGAGCAGCAGTGCCCTCTTCCAGGATGTG
CATAAGCTCCAAGATGAGTGGAGTAAAACTGTGTGCATCATGGAAGCTACCATGGTACTG
GAGAAGCACCGGAATGAGATCCTTTTGGATCTGCATGCCCTGGGTTTTTGCTGTGCAGAT
ACCCATCTTTGAGATTTACTGGGGATGCACTTCCTAGGTCAGGAAATGAAACTCAGGAAG
AAAGAGGGATGACCATCTGACTGACTGAGGAAGGATGGCTCCCAGGCCGGGGTGACAAGT
ATTTTTTGGAAAGGCTCAGTCTCAAGCACAAC


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
AERLLKMQNQRGGRALFQDVQKPSQDEWGKTLDAMEAALVLEKSLNQALLDLHALGSARTDPHLCDFLENHFLDEEVKLIKKMG-DHLTN-LRRLAGPQA
A..LLK.QNQ....ALFQDV.K..QDEW.KT...MEA..VLEK..N..LLDLHALG....D.HL.D.L..HFL..E.KL.KK.G.DHLT..LR...G.QA
Retrocopy
APSLLKRQNQQSSSALFQDVHK-LQDEWSKTVCIMEATMVLEKHRNEILLDLHALGFCCADTHL*DLLGMHFLGQEMKLRKKEG\DHLTD/LRK-DGSQA


Parental protein
GL-GEYLFERLTLKHD
G....Y..ERL.LKH.
Retrocopy
GV/DKYFLERLSLKHN


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide