RetrogeneDB ID:
retro_mputfur_1218
Organism:
Location:
GL897044.1:5735709-5736177 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
77.85 %
Coverage:
97.5 %
Frameshifts:
2
Stop codons:
0


Parental gene:
Parental gene symbol:
MAX
Parental gene aliases:
No gene alias available
Parental gene description:
MYC associated factor X [Source:HGNC Symbol;Acc:6913]

Genomic region (view in browser)





>retro_mputfur_1218
ATGAGTGACAACAAGGACATGGAGGTGGAGAGCTATGAAGAGCAACCAAGGTTTCAATCT
GCAGCTGACAAACAGGCTCATCATAGCTCACTGGAACAAAAACGTGGGAACTACATCAAA
GACAGCTTTCACAGTTTGTGGGACTCTGTTCCATCACTCCAAAGGACAGCAGGCACCATG
GGCCCAAACCCTAGACAAACCCACAGAGTATATCCAGTGTATGCAAAGGGAAAACTACAC
ACACCAGCAAGATATTGATGACCTCAAGCGGCAGAATGATCTTCTGGAGCAGCAAGTCCG
TGCACTGGAAAGGCAAGATCAAGTGTCCAACTGCGGACCAACTACCCCTCCTCAGACAAT
AGCCTCTACACCAGCGCCAGGGGCAGTACTATTTCTGCCTTTAATGGAGGCTCAGACTGC
AGTTTGGAGTCAGAGCCTGAAGAGCCCCAAAACAGTAAAACCTCCAGA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MSDNDDIEVESDEEQPRFQSAADKRAHHNALERKRRDHIKDSFHSLRDSVPSLQ-GEKASRAQILDKATEYIQYMRRKNHTHQQDIDDLKRQNALLEQQV
MSDN.D.EVES.EEQPRFQSAADK.AHH..LE.KR...IKDSFHSL.DSVPSLQ.G..A..AQ.LDK.TEYIQ.M.R.N.THQQDIDDLKRQN.LLEQQV
Retrocopy
MSDNKDMEVESYEEQPRFQSAADKQAHHSSLEQKRGNYIKDSFHSLWDSVPSLQ\GQQAPWAQTLDKPTEYIQCMQRENYTHQQDIDDLKRQNDLLEQQV


Parental protein
RALE-KARSSAQLQTNYPSSDNSLYTNAKGSTISAFDGGSDSSSESEPEEPQSRKKLR
RALE.KARSS.QL.TNYPSSDNSLYT.A.GSTISAF.GGSD.S.ESEPEEPQ..K..R
Retrocopy
RALE/KARSSVQLRTNYPSSDNSLYTSARGSTISAFNGGSDCSLESEPEEPQNSKTSR


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide