RetrogeneDB ID:
retro_mputfur_1222
Organism:
Location:
GL897045.1:3822893-3823286 (-)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
64.44 %
Coverage:
76.0 %
Frameshifts:
2
Stop codons:
0


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_1222
AATTACTCTACTGAGGTGGAGGCTACCATCAACCACCTGGTCAGCATGCCAACATACCTC
TTACACTTAGTCTCTCTGGGCTTCTATGTCCACACCAAACTCTGTGGCTCTGGAGGGTGT
TGACCACTTCTTCCTGGAGTGGGAGGAGAAGCGTGAGGGTGCTGAGTGTCTCTTAAAAAT
GCAAAACCAGCCTAGTGACCACTCCCTCTTCCAGCATGGGCAGAAGCCATCCCAGAATGG
ATGGAGTAAAATCCTAGATGCTATGGAACTGCCACCGCTCTGGAGAAGAACATGAACCAG
GCCCTTTTGGATCTGCATGCTCTGGACTTTGTCCCCACAGGTGACCATCTCTGTGGATTC
CTGGAGAACCACTTCCTGGATGAGGAGGTGAAA


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
NYSTEVEAAVNRLVNMHLRASYTYLSLGFYFDR-DDVALEGVGHFFRELAEEKREGAERLLKMQNQRGGRALFQDVQKPSQDEWGKTLDAME-AALVLEK
NYSTEVEA..N.LV.M.........SLGFY......VALEGV.HFF.E..EEKREGAE.LLKMQNQ.....LFQ..QKPSQ..W.K.LDAME..A..LEK
Retrocopy
NYSTEVEATINHLVSMPTYLLHL-VSLGFYVHT\NSVALEGVDHFFLEW-EEKREGAECLLKMQNQPSDHSLFQHGQKPSQNGWSKILDAME/TATALEK


Parental protein
SLNQALLDLHALGSARTDPHLCDFLENHFLDEEVK
..NQALLDLHAL....T..HLC.FLENHFLDEEVK
Retrocopy
NMNQALLDLHALDFVPTGDHLCGFLENHFLDEEVK


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide