RetrogeneDB ID:
retro_mputfur_1225
Organism:
Location:
GL897046.1:2387612-2387949 (+)
Status:
NOVEL
Ensembl ID:
None
Aliases:
No gene alias available
Located in intron of:
None
Alignment summary

Identity:
71.55 %
Coverage:
65.14 %
Frameshifts:
2
Stop codons:
1


Parental gene:
Parental gene symbol:
No gene symbol available
Parental gene aliases:
No gene alias available
Parental gene description:
No gene description available

Genomic region (view in browser)





>retro_mputfur_1225
ATGAGCAACTAGATCCATCAGAATTATTCCAGCAAGGTAGAGGCTGCCATCAACTGCCTA
GTCTACATGCATCTGCAGGCCTCCTACACCAACCTCTCTCAGCTTCCATTTGACCTTGAT
GATGTGGCTCTGGAAGATGTGGGCTACTTCTTCCACCAGTTGGCTAAAGAGAAGCCTGAG
GGTGCTAAGTATCTCTTAAAAATGCAAAATCTGTGCGGAGGCCTCATCCTCTTCAGAAAG
TGCAGAAGCAGTCCCAAGATGAGTGGGGGAAAGCCCTGGATGCCACAGAAGCTGCCCTGG
TTCTGGAAAAGAGCCTGAATCAGGCCTTTTGGATCTG


Parental protein coverage





Changes in the retrocopy sequence






Parental protein
MSSQIRQNYSTEVEAAVNRLVNMHLRASYTYLSLGFYFDRDDVALEGVGHFFRELAEEKREGAERLLKMQNQRGGRALF-QDVQKPSQDEWGKTLDAMEA
MS..I.QNYS..VEAA.N.LV.MHL.ASYT.LS....FD.DDVALE.VG.FF..LA.EK.EGA..LLKMQN..GG..LF.Q.VQK.SQDEWGK.LDA.EA
Retrocopy
MSN*IHQNYSSKVEAAINCLVYMHLQASYTNLSQ-LPFDLDDVALEDVGYFFHQLAKEKPEGAKYLLKMQNLCGGLILF/QKVQKQSQDEWGKALDATEA


Parental protein
ALVLEKSLNQA-LLDL
ALVLEKSLNQA.LLDL
Retrocopy
ALVLEKSLNQA/LLDL


Legend:
*
Stop codon
\
Forward frameshift by one nucleotide
/
Reverse frameshift by one nucleotide